RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 OCRLQ01968 901 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 TBCCQ15814 346 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF568Q3ZCX4 644 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 KCTD16Q68DU8 428 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 RHPN2Q8IUC4 686 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 RAVER2Q9HCJ3 691 aaKnown RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 NPC1L1Q9UHC9 1359 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 PER1O15534 1290 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 LDHAP00338 332 aaKnown RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 MMP1P03956 469 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 TTLL4Q14679 1199 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 YAF2Q8IY57 180 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 KRT82Q9NSB4 513 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 KCNH4Q9UQ05 1017 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 SEPT2Q15019 361 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 TRIP13Q15645 432 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 PDCD2Q16342 344 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ANKRD20A4Q4UJ75 823 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ANKRD20A8PQ5CZ79 823 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 PPP6R3Q5H9R7 873 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ANKRD20A2Q5SQ80 823 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ANKRD20A1Q5TYW2 823 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 MYRIPQ8NFW9 859 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 NR5A1Q13285 461 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF394Q53GI3 561 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 SNRNP48Q6IEG0 339 aaKnown RBP12.05□□□□□ -0.48
PTCH1-205ENST00000418258 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 MTMR6Q9Y217 621 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 CAPN7Q9Y6W3 813 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 CDC25AP30304 524 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 PLTPP55058 493 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 MXD4Q14582 209 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-205ENST00000418258 SLMAPQ14BN4 828 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 SLC10A5Q5PT55 438 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 LRRC31Q6UY01 552 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 THNSL1Q8IYQ7 743 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 CCDC138Q96M89 665 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 FEM1BQ9UK73 627 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 RBL2Q08999 1139 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF699Q32M78 642 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF667Q5HYK9 610 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 GRAMD1CQ8IYS0 662 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 LZICQ8WZA0 190 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 PUS7LQ9H0K6 701 aaKnown RBP12.05□□□□□ -0.48
PTCH1-205ENST00000418258 CHD1O14646 1710 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 TNFAIP2Q03169 654 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 ZBTB41Q5SVQ8 909 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-205ENST00000418258 PIGBQ92521 554 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 ATP6V0A4Q9HBG4 840 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 SNX2O60749 519 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 FCER1AP12319 257 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 FAM95CA0A1B0GW59 222 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 WDR91A4D1P6 747 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 BRD1O95696 1058 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 MT-ND3P03897 115 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 ARHGDIAP52565 204 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 DCAF4Q8WV16 495 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 EPB41L5Q9HCM4 733 aa12.05□□□□□ -0.48
PTCH1-205ENST00000418258 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 BEST2Q8NFU1 509 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 STAG1Q8WVM7 1258 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 GPR108Q9NPR9 543 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 KLHL8Q9P2G9 620 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 PRAMEF22A3QJZ6 481 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 PLS3P13797 630 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 TCP11X2Q5H9J9 407 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 ANTXR1Q9H6X2 564 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 DYRK4Q9NR20 520 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 ABCB11O95342 1321 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 SERPING1P05155 500 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 GLE1Q53GS7 698 aaKnown RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 SYNE4Q8N205 404 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 ACRBPQ8NEB7 543 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 FAF2Q96CS3 445 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 SYNDIG1Q9H7V2 258 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 SYNDIG1LA6NDD5 238 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 SRRM1Q8IYB3 904 aaKnown RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 EFHD1Q9BUP0 239 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 COG4Q9H9E3 785 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 SARS2Q9NP81 518 aaKnown RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 NEO1Q92859 1461 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 USP17L5A8MUK1 530 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 CREB3O43889 395 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 TJP3O95049 919 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 CAPRIN1Q14444 709 aaKnown RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 DCAF4L1Q3SXM0 396 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 PYROXD1Q8WU10 500 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 FAM167AQ96KS9 214 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 LBHD1Q9BQE6 289 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 TMEM106CQ9BVX2 250 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 H3BRJ5 948 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms