RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 HERVK_113P62684 666 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 TBC1D8BQ0IIM8 1120 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 E4F1Q66K89 784 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 OPTNQ96CV9 577 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 MRPL44Q9H9J2 332 aaKnown RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 PKD2L1Q9P0L9 805 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 BTBD7Q9P203 1132 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 B4DLN1 442 aa18.56■□□□□ 0.56
SSBP3-205ENST00000417664 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
SSBP3-205ENST00000417664 ATP9AO75110 1047 aa18.56■□□□□ 0.56
SSBP3-205ENST00000417664 CASP14P31944 242 aa18.56■□□□□ 0.56
SSBP3-205ENST00000417664 STXBP2Q15833 593 aa18.56■□□□□ 0.56
SSBP3-205ENST00000417664 FIGNQ5HY92 759 aa18.56■□□□□ 0.56
SSBP3-205ENST00000417664 MIIPQ5JXC2 388 aa18.56■□□□□ 0.56
SSBP3-205ENST00000417664 GTF3C2Q8WUA4 911 aaPredicted RBP18.56■□□□□ 0.56
SSBP3-205ENST00000417664 PURBQ96QR8 312 aaKnown RBP18.56■□□□□ 0.56
SSBP3-205ENST00000417664 ANKEF1Q9NU02 776 aa18.56■□□□□ 0.56
SSBP3-205ENST00000417664 PCDHA10Q9Y5I2 948 aa18.56■□□□□ 0.56
SSBP3-205ENST00000417664 ZSCAN12O43309 604 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 CALUO43852 315 aaPredicted RBP18.55■□□□□ 0.56
SSBP3-205ENST00000417664 EIF3JO75822 258 aaKnown RBP18.55■□□□□ 0.56
SSBP3-205ENST00000417664 KCNA2P16389 499 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 ICAM3P32942 547 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 SNAPC2Q13487 334 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 VWA3BQ502W6 1294 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 MOB2Q70IA6 237 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 PRIMPOLQ96LW4 560 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 MOV10L1Q9BXT6 1211 aaKnown RBP18.55■□□□□ 0.56
SSBP3-205ENST00000417664 FGFBP2Q9BYJ0 223 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 NDST4Q9H3R1 872 aa18.55■□□□□ 0.56
SSBP3-205ENST00000417664 RSPH10B2B2RC85 870 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 SPATA31C2B4DYI2 1134 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 CETN3O15182 167 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 RSPH10BP0C881 870 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 MAPTP10636 758 aaKnown RBP18.54■□□□□ 0.56
SSBP3-205ENST00000417664 RPL13P26373 211 aaKnown RBP18.54■□□□□ 0.56
SSBP3-205ENST00000417664 FKBP1BP68106 108 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 NELFCDQ8IXH7 590 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 MYCT1Q8N699 235 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 TYW1Q9NV66 732 aaKnown RBP18.54■□□□□ 0.56
SSBP3-205ENST00000417664 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.54■□□□□ 0.56
SSBP3-205ENST00000417664 GOLGA6L9A6NEM1 432 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 ZBTB39O15060 712 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 RGS20O76081 388 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 GCNT3O95395 438 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 YWHABP31946 246 aaKnown RBP18.54■□□□□ 0.56
SSBP3-205ENST00000417664 RARRES1P49788 294 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 FXR1P51114 621 aaKnown RBP eCLIP18.54■□□□□ 0.56
SSBP3-205ENST00000417664 CASP5P51878 434 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 MOGSQ13724 837 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 ALCAMQ13740 583 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 PTPN14Q15678 1187 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 NFIL3Q16649 462 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 CEP135Q66GS9 1140 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 PADI6Q6TGC4 694 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 NYAP1Q6ZVC0 841 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 TMTC1Q8IUR5 882 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 SLC10A4Q96EP9 437 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 EEF2KMTQ96G04 330 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 MPHOSPH6Q99547 160 aaKnown RBP18.54■□□□□ 0.56
SSBP3-205ENST00000417664 FAM184BQ9ULE4 1060 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 CAPN11Q9UMQ6 739 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 LUC7L2Q9Y383 392 aaKnown RBP18.54■□□□□ 0.56
SSBP3-205ENST00000417664 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
SSBP3-205ENST00000417664 CCNE2O96020 404 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 TNNT1P13805 278 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 PPP2R3AQ06190 1150 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 GOLGA8FQ08AF8 430 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 GOLGA8DPQ0D2H9 430 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 ADAM9Q13443 819 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 NCAPG2Q86XI2 1143 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 FAM178BQ8IXR5 827 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 SLC17A8Q8NDX2 589 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 CPLX3Q8WVH0 158 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 ATP6V0A1Q93050 837 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 C16orf45Q96MC5 204 aaPredicted RBP18.53■□□□□ 0.56
SSBP3-205ENST00000417664 CCDC43Q96MW1 224 aaKnown RBP18.53■□□□□ 0.56
SSBP3-205ENST00000417664 ABHD10Q9NUJ1 306 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 LARSQ9P2J5 1176 aaKnown RBP18.53■□□□□ 0.56
SSBP3-205ENST00000417664 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 CLEC11AQ9Y240 323 aa18.53■□□□□ 0.56
SSBP3-205ENST00000417664 A0A1W2PQJ5 194 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 POTEB2H3BUK9 544 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 PSAPP07602 524 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 MYBP10242 640 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 EDNRBP24530 442 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 KRT9P35527 623 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 ALDH5A1P51649 535 aaPredicted RBP18.52■□□□□ 0.56
SSBP3-205ENST00000417664 TSR1Q2NL82 804 aaKnown RBP18.52■□□□□ 0.56
SSBP3-205ENST00000417664 CCDC40Q4G0X9 1142 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 OTUD6AQ7L8S5 288 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 ZNF720Q7Z2F6 126 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 OR8K1Q8NGG5 319 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 PPP1R13BQ96KQ4 1090 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 JPH1Q9HDC5 661 aaPredicted RBP18.52■□□□□ 0.56
SSBP3-205ENST00000417664 SLC9A2Q9UBY0 812 aa18.52■□□□□ 0.56
SSBP3-205ENST00000417664 LOC102724159A0A0B4J2E5 919 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 USP27XA6NNY8 438 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 CNMDO75829 334 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 TRIM21P19474 475 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms