RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ADAMTS4O75173 837 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 CD4P01730 458 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 PROS1P07225 676 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 ARAFP10398 606 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 RLBP1P12271 317 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 MX2P20592 715 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 FAM193AP78312 1265 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 PTPROQ16827 1216 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 FBXL19Q6PCT2 694 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 HHIPL2Q6UWX4 724 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 VN1R5Q7Z5H4 357 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 RPAINQ86UA6 219 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 BSNDQ8WZ55 320 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 MRPL38Q96DV4 380 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 TGS1Q96RS0 853 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 DNAJC2Q99543 621 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 MYD88Q99836 296 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 RTKNQ9BST9 563 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 AS3MTQ9HBK9 375 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 NRBP1Q9UHY1 535 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 SOX13Q9UN79 622 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 RABGAP1Q9Y3P9 1069 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 FLNBO75369 2602 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 COL4A3Q01955 1670 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 LCHNA4D1U4 455 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 GREM1O60565 184 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 SMNDC1O75940 238 aaKnown RBP eCLIP6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 PF4P02776 101 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 TFE3P19532 575 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 ADORA2AP29274 412 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 GTF2F1P35269 517 aaKnown RBP eCLIP6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 ADH7P40394 386 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 ERVK-21P61565 698 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 FAM160A1Q05DH4 1040 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 CHAF1AQ13111 956 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 CBX2Q14781 532 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 NFE2L2Q16236 605 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 KCNA10Q16322 511 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 PTPN21Q16825 1174 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 ZNF423Q2M1K9 1284 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 TCEAL5Q5H9L2 206 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 TTBK2Q6IQ55 1244 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 CDC42EP5Q6NZY7 148 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 AGMOQ6ZNB7 445 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 FCHSD1Q86WN1 690 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 VPS37DQ86XT2 251 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 LPIN3Q9BQK8 851 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 ADAM19Q9H013 955 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 RBSNQ9H1K0 784 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 RRAGDQ9NQL2 400 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 SLC5A4Q9NY91 659 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 TRIM33Q9UPN9 1127 aa6.59□□□□□ -1.35
ECHDC1-206ENST00000417628 SYNRGQ9UMZ2 1314 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 NCK2O43639 380 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 CNMDO75829 334 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 AKR1A1P14550 325 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 ADH6P28332 368 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 HIBADHP31937 336 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 ICAM3P32942 547 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 LMNB2Q03252 620 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 PCDH1Q08174 1060 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 RBL2Q08999 1139 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 ANGPT1Q15389 498 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 ELMSAN1Q6PJG2 1045 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 DCLK2Q8N568 766 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 LENG1Q96BZ8 264 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 VWCEQ96DN2 955 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 SCLYQ96I15 445 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 ZNF830Q96NB3 372 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 TSPYL1Q9H0U9 437 aa6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 SMG9Q9H0W8 520 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 OSBPL5Q9H0X9 879 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 CLEC4MQ9H2X3 399 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 NSUN3Q9H649 340 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 GEMIN8Q9NWZ8 242 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 GPN3Q9UHW5 284 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-206ENST00000417628 MYH3P11055 1940 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 NEURL1BA8MQ27 555 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 PRR5-ARHGAP8B1AHC4 643 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 TAF4O00268 1085 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 B3GALT4O96024 378 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 BMP6P22004 513 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 CST5P28325 142 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 LTBRP36941 435 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 GYG1P46976 350 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 ARHGAP8P85298 464 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 PCNX4Q63HM2 1172 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 CCSAPQ6IQ19 270 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 DPH6Q7L8W6 267 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 DEFB128Q7Z7B8 93 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 CRACR2BQ8N4Y2 399 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 KLHDC9Q8NEP7 349 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 STK35Q8TDR2 534 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 HNRNPABQ99729 332 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 NT5C1AQ9BXI3 368 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 LNPKQ9C0E8 428 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 LACRTQ9GZZ8 138 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms