RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CYP3A7-CYP3A51PA0A087WV96 503 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 GOLGA8KD6RF30 607 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 F5H6K3 240 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 TOM1O60784 492 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 GCNT3O95395 438 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 XRCC5P13010 732 aaKnown RBP15.87■□□□□ 0.13
HDAC9-208ENST00000417496 CYP3A7P24462 503 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 JAG1P78504 1218 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 KLRC3Q07444 240 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 GLE1Q53GS7 698 aaKnown RBP15.87■□□□□ 0.13
HDAC9-208ENST00000417496 ALS2CLQ60I27 953 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 ALKBH5Q6P6C2 394 aaKnown RBP15.87■□□□□ 0.13
HDAC9-208ENST00000417496 SLFN12Q8IYM2 578 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 IQCKQ8N0W5 287 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 USP38Q8NB14 1042 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 CRYGNQ8WXF5 182 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 TSPYL1Q9H0U9 437 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 NAGPAQ9UK23 515 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 TAF1LQ8IZX4 1826 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 EML1O00423 815 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 CEP104O60308 925 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 ZEB2O60315 1214 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 AFPP02771 609 aaKnown RBP15.86■□□□□ 0.13
HDAC9-208ENST00000417496 RPS6KA1Q15418 735 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 CFAP58Q5T655 872 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 ZC3H3Q8IXZ2 948 aaKnown RBP15.86■□□□□ 0.13
HDAC9-208ENST00000417496 SYT2Q8N9I0 419 aaPredicted RBP15.86■□□□□ 0.13
HDAC9-208ENST00000417496 MSH4O15457 936 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 RPA1P27694 616 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 ZC2HC1CQ53FD0 456 aaPredicted RBP15.86■□□□□ 0.13
HDAC9-208ENST00000417496 RNF14Q9UBS8 474 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 TRAF3IP3Q9Y228 551 aa15.86■□□□□ 0.13
HDAC9-208ENST00000417496 PITPNM2Q9BZ72 1349 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 ADAMTSL1Q8N6G6 1762 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 SPDYE3A6NKU9 549 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 EIF3HO15372 352 aaKnown RBP eCLIP15.85■□□□□ 0.13
HDAC9-208ENST00000417496 NR3C1P04150 777 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 CORO7P57737 925 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 ICA1Q05084 483 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 CTTNQ14247 550 aaKnown RBP15.85■□□□□ 0.13
HDAC9-208ENST00000417496 RUBCNQ92622 972 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 MBOAT7Q96N66 472 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 ASTN1O14525 1302 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 TMCO5BA8MYB1 307 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 OPLAHO14841 1288 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 CHMP2AO43633 222 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 TNFRSF8P28908 595 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 PAK2Q13177 524 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 HLTFQ14527 1009 aaKnown RBP eCLIP15.85■□□□□ 0.13
HDAC9-208ENST00000417496 HHIPL2Q6UWX4 724 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 EPM2AIP1Q7L775 607 aaPredicted RBP15.85■□□□□ 0.13
HDAC9-208ENST00000417496 FRMD5Q7Z6J6 570 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 TAF4BQ92750 862 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 SLC35C1Q96A29 364 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 CCDC17Q96LX7 622 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 AMNQ9BXJ7 453 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 ZNF219Q9P2Y4 722 aaPredicted RBP15.85■□□□□ 0.13
HDAC9-208ENST00000417496 FAM198AQ9UFP1 575 aa15.85■□□□□ 0.13
HDAC9-208ENST00000417496 KIF4AO95239 1232 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 NMT1P30419 496 aaKnown RBP15.84■□□□□ 0.13
HDAC9-208ENST00000417496 ERVK-9P63128 1117 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 UBXN2AP68543 259 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 GUCY1A3Q02108 690 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 COG2Q14746 738 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 EPHA7Q15375 998 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 OR2W6PQ8NHA6 318 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 GJD4Q96KN9 370 aaPredicted RBP15.84■□□□□ 0.13
HDAC9-208ENST00000417496 SIX2Q9NPC8 291 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 GCNT4Q9P109 453 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 SUGT1Q9Y2Z0 365 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 ARFGEF1Q9Y6D6 1849 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 KLRG2A4D1S0 409 aaPredicted RBP15.84■□□□□ 0.13
HDAC9-208ENST00000417496 GFPT2O94808 682 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 NDUFB10O96000 172 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 EPB41P11171 864 aaKnown RBP15.84■□□□□ 0.13
HDAC9-208ENST00000417496 ITGA4P13612 1032 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 MAGEA9P43362 315 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 SLC20A2Q08357 652 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 PACS2Q86VP3 889 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 FBXO11Q86XK2 927 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 SEPT12Q8IYM1 358 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 LRRC57Q8N9N7 239 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 RNPC3Q96LT9 517 aaKnown RBP15.84■□□□□ 0.13
HDAC9-208ENST00000417496 NAP1L4Q99733 375 aaKnown RBP15.84■□□□□ 0.13
HDAC9-208ENST00000417496 DDX47Q9H0S4 455 aaKnown RBP15.84■□□□□ 0.13
HDAC9-208ENST00000417496 CENPHQ9H3R5 247 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 BCS1LQ9Y276 419 aa15.84■□□□□ 0.13
HDAC9-208ENST00000417496 MYO3BQ8WXR4 1341 aa15.83■□□□□ 0.12
HDAC9-208ENST00000417496 HOXA7P31268 230 aaPredicted RBP15.83■□□□□ 0.12
HDAC9-208ENST00000417496 ZNF76P36508 570 aa15.83■□□□□ 0.12
HDAC9-208ENST00000417496 TPH2Q8IWU9 490 aa15.83■□□□□ 0.12
HDAC9-208ENST00000417496 ERMNQ8TAM6 284 aa15.83■□□□□ 0.12
HDAC9-208ENST00000417496 MKL1Q969V6 931 aa15.83■□□□□ 0.12
HDAC9-208ENST00000417496 EIF2AK1Q9BQI3 630 aaKnown RBP15.83■□□□□ 0.12
HDAC9-208ENST00000417496 PLCB1Q9NQ66 1216 aa15.83■□□□□ 0.12
HDAC9-208ENST00000417496 LTBP4Q8N2S1 1624 aa15.83■□□□□ 0.12
HDAC9-208ENST00000417496 PDXKO00764 312 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms