RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 MAP4K2Q12851 820 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 FXNQ16595 210 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 LARP1BQ659C4 914 aaKnown RBP4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 C6orf15Q6UXA7 325 aaPredicted RBP4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 USP53Q70EK8 1073 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 GSPT2Q8IYD1 628 aaKnown RBP4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 SHCBP1Q8NEM2 672 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 TMEM176AQ96HP8 235 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 OR10A2Q9H208 303 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 ACTR10Q9NZ32 417 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 CEP72Q9P209 647 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 MASP2O00187 686 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 PPFIA4O75335 1185 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 ADCY8P40145 1251 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 RRP1BQ14684 758 aaKnown RBP4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 SF1Q15637 639 aaKnown RBP4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 SLC35F1Q5T1Q4 408 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 STRIP1Q5VSL9 837 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 ZKSCAN2Q63HK3 967 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 DPH6Q7L8W6 267 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 EEPD1Q7L9B9 569 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 VPS37DQ86XT2 251 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 NT5DC4Q86YG4 428 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 NLGN4XQ8N0W4 816 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 HAS1Q92839 578 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 ALG1Q9BT22 464 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 PHF20Q9BVI0 1012 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 INPP5FQ9Y2H2 1132 aa4.95□□□□□ -1.62
TRAPPC13-203ENST00000415825 FAM47E-STBD1D6RA91 191 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 SLC26A4O43511 780 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 RPS6KA4O75676 772 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 PDE6AP16499 860 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 CD38P28907 300 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 DBPQ10586 325 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 DUSP8Q13202 625 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 BTBD8Q5XKL5 378 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 SYCE2Q6PIF2 218 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 METTL16Q86W50 562 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 KIAA1683Q9H0B3 1180 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 CDIP1Q9H305 208 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 RIC8BQ9NVN3 520 aa4.94□□□□□ -1.62
TRAPPC13-203ENST00000415825 A0A1W2PRX2 142 aa4.93□□□□□ -1.62
TRAPPC13-203ENST00000415825 MRE11P49959 708 aa4.93□□□□□ -1.62
TRAPPC13-203ENST00000415825 PTPAQ15257 358 aa4.93□□□□□ -1.62
TRAPPC13-203ENST00000415825 DENND5AQ6IQ26 1287 aa4.93□□□□□ -1.62
TRAPPC13-203ENST00000415825 FILIP1Q7Z7B0 1213 aa4.93□□□□□ -1.62
TRAPPC13-203ENST00000415825 OR14K1Q8NGZ2 314 aa4.93□□□□□ -1.62
TRAPPC13-203ENST00000415825 ZFYVE21Q9BQ24 234 aa4.93□□□□□ -1.62
TRAPPC13-203ENST00000415825 MATN2O00339 956 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 SMAD7O15105 426 aaKnown RBP4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 SSBP05455 408 aaKnown RBP eCLIP4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 MAN2A2P49641 1150 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 EPHA5P54756 1037 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 PCOLCEQ15113 449 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 EPHA10Q5JZY3 1008 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 PCSK4Q6UW60 755 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 DCAF4Q8WV16 495 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 C1orf159Q96HA4 380 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 CDC42EP3Q9UKI2 254 aa4.92□□□□□ -1.62
TRAPPC13-203ENST00000415825 A0A0G2JNJ9 132 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 TRAF5O00463 557 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 NKRFO15226 690 aaKnown RBP eCLIP4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 PTGS1P23219 599 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 GJA4P35212 333 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 LBX2Q6XYB7 198 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 RPUSD2Q8IZ73 545 aaKnown RBP4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 MIEF2Q96C03 454 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 ZNF764Q96H86 408 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 IER2Q9BTL4 223 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 TGIF2Q9GZN2 237 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 CCSER2Q9H7U1 834 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 INCENPQ9NQS7 918 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 PPARGC1AQ9UBK2 798 aaKnown RBP4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 Q9UFV3 132 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 PACSIN3Q9UKS6 424 aa4.91□□□□□ -1.62
TRAPPC13-203ENST00000415825 PMS2P1A4D2B8 440 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 IQCA1LA6NCM1 817 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 ZAR1LA6NP61 321 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 RECKO95980 971 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 LMNAP02545 664 aaKnown RBP4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 SOD2P04179 222 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 ERBB2P04626 1255 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 APPP05067 770 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 ADRA1BP35368 520 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 HSP90AA2PQ14568 343 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 EIF4HQ15056 248 aaKnown RBP4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 TBR1Q16650 682 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 LY6G5CQ5SRR4 150 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 TMCO4Q5TGY1 634 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 GPR135Q8IZ08 494 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 IFNL3Q8IZI9 196 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 SLC25A43Q8WUT9 341 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 CFHR4Q92496 578 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 CAPN10Q9HC96 672 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 GALNT8Q9NY28 637 aa4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 R3HCC1Q9Y3T6 440 aaKnown RBP4.9□□□□□ -1.63
TRAPPC13-203ENST00000415825 A0A0A6YYK5 440 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 GOLGA8BA8MQT2 603 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 PTPN1P18031 435 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms