RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PSMC5P62195 406 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 FAM133AQ8N9E0 248 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 DPH5Q9H2P9 285 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 BCAP29Q9UHQ4 241 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 TACC3Q9Y6A5 838 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 AKR1B1P15121 316 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 GUCY2FP51841 1108 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 ATP11AP98196 1134 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 OR6B2Q6IFH4 312 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 MICALL2Q8IY33 904 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 ANAPC5Q9UJX4 755 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 WDR46O15213 610 aaKnown RBP18.68■□□□□ 0.58
PHRF1-202ENST00000413872 TTC39CQ8N584 583 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 GTF3C2Q8WUA4 911 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-202ENST00000413872 PBKQ96KB5 322 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 TCP11X2Q5H9J9 407 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 MTRQ99707 1265 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-202ENST00000413872 CNOT7Q9UIV1 285 aaKnown RBP18.68■□□□□ 0.58
PHRF1-202ENST00000413872 BCORL1Q5H9F3 1711 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 MYO3AQ8NEV4 1616 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 GOLGA8KD6RF30 607 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 NMT2O60551 498 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 ARL13BQ3SXY8 428 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 VSTM4Q8IW00 320 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 THEM5Q8N1Q8 247 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 PIGOQ8TEQ8 1089 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 HEXIM2Q96MH2 286 aaKnown RBP18.67■□□□□ 0.58
PHRF1-202ENST00000413872 NOC2LQ9Y3T9 749 aaKnown RBP18.67■□□□□ 0.58
PHRF1-202ENST00000413872 PGRMC1O00264 195 aaKnown RBP18.67■□□□□ 0.58
PHRF1-202ENST00000413872 RPS12P25398 132 aaKnown RBP18.67■□□□□ 0.58
PHRF1-202ENST00000413872 CEP85LQ5SZL2 805 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 TTBK2Q6IQ55 1244 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 CCDC13Q8IYE1 715 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 PANX2Q96RD6 677 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 SAMSN1Q9NSI8 373 aaKnown RBP18.67■□□□□ 0.58
PHRF1-202ENST00000413872 NTSR2O95665 410 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 EFCAB13Q8IY85 973 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 PIK3C2BO00750 1634 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 PRPSAP2O60256 369 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 CIITAP33076 1130 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 CALR3Q96L12 384 aaKnown RBP18.67■□□□□ 0.58
PHRF1-202ENST00000413872 NYAP2Q9P242 653 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 POTEMA6NI47 508 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 ARHGAP25P42331 645 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 COG2Q14746 738 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 SLFNL1Q499Z3 407 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 RHOT2Q8IXI1 618 aa18.67■□□□□ 0.58
PHRF1-202ENST00000413872 RPAP3Q9H6T3 665 aaPredicted RBP18.67■□□□□ 0.58
PHRF1-202ENST00000413872 IPO5O00410 1097 aaKnown RBP18.66■□□□□ 0.58
PHRF1-202ENST00000413872 COBLO75128 1261 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 KRT1P04264 644 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 ZNF131P52739 623 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 BZW1Q7L1Q6 419 aaKnown RBP18.66■□□□□ 0.58
PHRF1-202ENST00000413872 THNSL1Q8IYQ7 743 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 TTC1Q99614 292 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 MAD1L1Q9Y6D9 718 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 SGK1O00141 431 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 RASSF2P50749 326 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 RPS6KA2Q15349 733 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 NOL3O60936 208 aaKnown RBP18.66■□□□□ 0.58
PHRF1-202ENST00000413872 CD58P19256 250 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 RSBN1LQ6PCB5 846 aaPredicted RBP18.66■□□□□ 0.58
PHRF1-202ENST00000413872 A0A0G2JLW4 131 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 SCARF1Q14162 830 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 LDHDQ86WU2 507 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 SLC8A2Q9UPR5 921 aa18.66■□□□□ 0.58
PHRF1-202ENST00000413872 KYAT1Q16773 422 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 SFR1Q86XK3 245 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 DYDC2Q96IM9 177 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 DAAM1Q9Y4D1 1078 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 DCCP43146 1447 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 SGO2Q562F6 1265 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 ZNF449Q6P9G9 518 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 SLC35F6Q8N357 371 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 BEST2Q8NFU1 509 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 PRPF31Q8WWY3 499 aaKnown RBP18.65■□□□□ 0.58
PHRF1-202ENST00000413872 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 EIF4A3P38919 411 aaKnown RBP18.65■□□□□ 0.58
PHRF1-202ENST00000413872 ADAT2Q7Z6V5 191 aaKnown RBP18.65■□□□□ 0.58
PHRF1-202ENST00000413872 MB21D1Q8N884 522 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 BANK1Q8NDB2 785 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 FAM151AQ8WW52 585 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 RABGGTAQ92696 567 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 MTMR4Q9NYA4 1195 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 FLT1P17948 1338 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 FAM170AA1A519 330 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 GOLGA8IPA6NC78 632 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 GOLGA8JA6NMD2 632 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 NFKBIAP25963 317 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 ARPP19P56211 112 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 YWHAGP61981 247 aaKnown RBP eCLIP18.65■□□□□ 0.584e-6■■■■□ 21.1
PHRF1-202ENST00000413872 EPHA7Q15375 998 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 PTPROQ16827 1216 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 ZNF568Q3ZCX4 644 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 RILPQ96NA2 401 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 CPVLQ9H3G5 476 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 HACL1Q9UJ83 578 aa18.65■□□□□ 0.58
PHRF1-202ENST00000413872 UBN2Q6ZU65 1347 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms