RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 RRP1BQ14684 758 aaKnown RBP3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 LARP1BQ659C4 914 aaKnown RBP3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 Q6ZPA2 131 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 LARP4Q71RC2 724 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 RPUSD2Q8IZ73 545 aaKnown RBP3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 CFHR4Q92496 578 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 SEC16BQ96JE7 1060 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 FBXO10Q9UK96 956 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 CDC42EP3Q9UKI2 254 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 STRIP2Q9ULQ0 834 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 E9PSI1 815 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 AGRPO00253 132 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 RPS6KA4O75676 772 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 DDAH1O94760 285 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 EPHA5P54756 1037 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 COL10A1Q03692 680 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 MAP4K2Q12851 820 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 PCOLCEQ15113 449 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 KIZQ2M2Z5 673 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 GPR135Q8IZ08 494 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 OR14K1Q8NGZ2 314 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 WDR48Q8TAF3 677 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 ZNF428Q96B54 188 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 CD244Q9BZW8 370 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 OR10A2Q9H208 303 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 NRDE2Q9H7Z3 1164 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 PTGFRNQ9P2B2 879 aa3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P2-201ENST00000411913 B2RBV5 119 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 SCAMP3O14828 347 aaKnown RBP3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 GCP02774 474 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 FBLP22087 321 aaKnown RBP3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 GRIA2P42262 883 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 GJA8P48165 433 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 MRE11P49959 708 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 CNGB1Q14028 1251 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 BTBD8Q5XKL5 378 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 RSPO2Q6UXX9 243 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 LBX2Q6XYB7 198 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 CXXC5Q7LFL8 322 aaKnown RBP3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 OTOP2Q7RTS6 562 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 FILIP1Q7Z7B0 1213 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 RTKN2Q8IZC4 609 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 SHCBP1Q8NEM2 672 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 IER2Q9BTL4 223 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 ACTR10Q9NZ32 417 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 ZNHIT2Q9UHR6 403 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 FAM184BQ9ULE4 1060 aa3.97□□□□□ -1.77
HMGB3P2-201ENST00000411913 MASP2O00187 686 aa3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 SMAD7O15105 426 aaKnown RBP3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 SLC26A4O43511 780 aa3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 RHOBTB3O94955 611 aa3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 ADRA1BP35368 520 aa3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 HABP4Q5JVS0 413 aaKnown RBP3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 SPTY2D1Q68D10 685 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 ZNF662Q6ZS27 426 aa3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 GPR150Q8NGU9 434 aa3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 RIOX1Q9H6W3 641 aa3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 RIC8BQ9NVN3 520 aa3.96□□□□□ -1.78
HMGB3P2-201ENST00000411913 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 FAM47E-STBD1D6RA91 191 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 SOD2P04179 222 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 PTGS1P23219 599 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 PTGS2P35354 604 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 PPP2R2AP63151 447 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 IL13RA1P78552 427 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 SLC25A3Q00325 362 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 EIF4HQ15056 248 aaKnown RBP3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 ZKSCAN2Q63HK3 967 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 KCNT2Q6UVM3 1135 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 EP400NLQ6ZTU2 488 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 NLGN4XQ8N0W4 816 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 ANKRD35Q8N283 1001 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 DCAF4Q8WV16 495 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 HAS1Q92839 578 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 MPHOSPH9Q99550 1183 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 INCENPQ9NQS7 918 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 GALNT8Q9NY28 637 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 GPRC5BQ9NZH0 403 aa3.95□□□□□ -1.78
HMGB3P2-201ENST00000411913 UNCXA6NJT0 531 aa3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 DLX3O60479 287 aa3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 LMNAP02545 664 aaKnown RBP3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 PTPN1P18031 435 aaKnown RBP3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 GJA4P35212 333 aa3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 FXNQ16595 210 aa3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 MBNL2Q5VZF2 373 aaKnown RBP3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 TRIM68Q6AZZ1 485 aa3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 EEPD1Q7L9B9 569 aa3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 METTL16Q86W50 562 aaKnown RBP3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 GSPT2Q8IYD1 628 aaKnown RBP3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 ZNF764Q96H86 408 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 AGO3Q9H9G7 860 aaKnown RBP3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 ADARB2Q9NS39 739 aaKnown RBP3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 SH3BP1Q9Y3L3 701 aa3.94□□□□□ -1.78
HMGB3P2-201ENST00000411913 A0A0G2JNJ9 132 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 A0A1W2PRX2 142 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 FAM90A27PA6NNH2 459 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 CAPNS1P04632 268 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 PROZP22891 400 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 SCNN1GP51170 649 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms