RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 PLCB4Q15147 1175 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 NAALADL2Q58DX5 795 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 RNF135Q8IUD6 432 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 KLHL23Q8NBE8 558 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 SPPL3Q8TCT6 385 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 PPP2R3CQ969Q6 453 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 MXRA8Q9BRK3 442 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 CELF4Q9BZC1 486 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 MUTYHQ9UIF7 546 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 PCDHA2Q9Y5H9 948 aa16.3■□□□□ 0.2
HLA-DQB2-229ENST00000411527 IGSF9BQ9UPX0 1349 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 GATMP50440 423 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 STAT5BP51692 787 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 ACTR2P61160 394 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 PAK2Q13177 524 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 HFE2Q6ZVN8 426 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 TMTC3Q6ZXV5 915 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 PLPPR4Q7Z2D5 763 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 ADGRD2Q7Z7M1 963 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 CYP2W1Q8TAV3 490 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 FBXL18Q96ME1 805 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 SDF4Q9BRK5 362 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 LRRC2Q9BYS8 371 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 LRFN2Q9ULH4 789 aa16.29■□□□□ 0.2
HLA-DQB2-229ENST00000411527 C5orf42Q9H799 3197 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 NFASCO94856 1347 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 ARP10275 920 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 SCG2P13521 617 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 MRE11P49959 708 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 NHLH1Q02575 133 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 HERC4Q5GLZ8 1057 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 RBM23Q86U06 439 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 POF1BQ8WVV4 589 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 MSLNLQ96KJ4 702 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 KCNH6Q9H252 994 aa16.28■□□□□ 0.2
HLA-DQB2-229ENST00000411527 PLXNA4Q9HCM2 1894 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 SMIM35A0A1B0GVV1 85 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 SLC27A2O14975 620 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 NRIP1P48552 1158 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 KRT76Q01546 638 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 NFX1Q12986 1120 aaKnown RBP16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 MTHFD1LQ6UB35 978 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 MICU3Q86XE3 530 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 NME8Q8N427 588 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 EFHBQ8N7U6 833 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 PGBD1Q96JS3 809 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 MFSD14AQ96MC6 490 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 LSG1Q9H089 658 aaKnown RBP16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 TMX1Q9H3N1 280 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 CLEC1BQ9P126 229 aa16.27■□□□□ 0.2
HLA-DQB2-229ENST00000411527 KDM3AQ9Y4C1 1321 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 EYA4O95677 639 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 KLRC1P26715 233 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 NAPAP54920 295 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 ITGB3BPQ13352 177 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 CEP55Q53EZ4 464 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 CREB3L3Q68CJ9 461 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 WWC2Q6AWC2 1192 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 MICAL1Q8TDZ2 1067 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 EDAQ92838 391 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 AGO4Q9HCK5 861 aaKnown RBP16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 GINS2Q9Y248 185 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 PCDHB7Q9Y5E2 793 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 EVPLQ92817 2033 aa16.26■□□□□ 0.19
HLA-DQB2-229ENST00000411527 FNDC1Q4ZHG4 1894 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 ATG7O95352 703 aa16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 FOSP01100 380 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 SARSP49591 514 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 COASYQ13057 564 aa16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 SPOUT1Q5T280 376 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 TYW1BQ6NUM6 668 aa16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 SGMS1Q86VZ5 419 aa16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 SMRP1Q8NCR6 262 aa16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 PCDHB12Q9Y5F1 795 aa16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 PCDHGC5Q9Y5F6 944 aa16.25■□□□□ 0.19
HLA-DQB2-229ENST00000411527 DDX39AO00148 427 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 MEIS1O00470 390 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 BACH1O14867 736 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 MGEA5O60502 916 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 RPS6KA5O75582 802 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 ZNF76P36508 570 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 SLC26A2P50443 739 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 NECTIN1Q15223 517 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 KIAA0319LQ8IZA0 1049 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 ADAM2Q99965 735 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 ANO3Q9BYT9 981 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 TLE6Q9H808 572 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 CDHR5Q9HBB8 845 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 ERVK-5Q9HDB9 667 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 BARX2Q9UMQ3 279 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 PIEZO1Q92508 2521 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 ZNF318Q5VUA4 2279 aa16.24■□□□□ 0.19
HLA-DQB2-229ENST00000411527 CNTNAP5Q8WYK1 1306 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms