RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PCDH10Q9P2E7 1040 aa12.27□□□□□ -0.45
CHMP3-205ENST00000409810 VAV3Q9UKW4 847 aa12.27□□□□□ -0.45
CHMP3-205ENST00000409810 PCDHA12Q9UN75 941 aa12.27□□□□□ -0.45
CHMP3-205ENST00000409810 UMODL1Q5DID0 1318 aa12.27□□□□□ -0.45
CHMP3-205ENST00000409810 LOXHD1Q8IVV2 1947 aa12.27□□□□□ -0.45
CHMP3-205ENST00000409810 MBLAC1A4D2B0 266 aaPredicted RBP12.26□□□□□ -0.45
CHMP3-205ENST00000409810 OATP04181 439 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 OR52Z1P0C646 297 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 THPOP40225 353 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 PSMC5P62195 406 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 ADAM17P78536 824 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 PRKCEQ02156 737 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 HIC1Q14526 733 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 HABP4Q5JVS0 413 aaKnown RBP12.26□□□□□ -0.45
CHMP3-205ENST00000409810 NCAPH2Q6IBW4 605 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 NEK9Q8TD19 979 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 SCLYQ96I15 445 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 RNPC3Q96LT9 517 aaKnown RBP12.26□□□□□ -0.45
CHMP3-205ENST00000409810 TTC12Q9H892 705 aaPredicted RBP12.26□□□□□ -0.45
CHMP3-205ENST00000409810 NRBP2Q9NSY0 501 aa12.26□□□□□ -0.45
CHMP3-205ENST00000409810 VPS37CA5D8V6 355 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-205ENST00000409810 RSPH10B2B2RC85 870 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 M0QZ92 97 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 WNT7AO00755 349 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 P4HBP07237 508 aaKnown RBP12.25□□□□□ -0.45
CHMP3-205ENST00000409810 RSPH10BP0C881 870 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 ACTN1P12814 892 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 TXKP42681 527 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 QARSP47897 775 aaKnown RBP12.25□□□□□ -0.45
CHMP3-205ENST00000409810 EPHA7Q15375 998 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 ZNF174Q15697 407 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 TMEM266Q2M3C6 531 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 TRIM71Q2Q1W2 868 aaKnown RBP12.25□□□□□ -0.45
CHMP3-205ENST00000409810 ZNF618Q5T7W0 954 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 BRAPQ7Z569 592 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 RPAINQ86UA6 219 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 MTMR9Q96QG7 549 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 FTOQ9C0B1 505 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHMP3-205ENST00000409810 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-205ENST00000409810 PCDHA2Q9Y5H9 948 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 ARID2Q68CP9 1835 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 MICAL3Q7RTP6 2002 aa12.25□□□□□ -0.45
CHMP3-205ENST00000409810 SMIM35A0A1B0GVV1 85 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 EML1O00423 815 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 LAD1O00515 517 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 MAGEB2O15479 319 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 FGBP02675 491 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 ACRP10323 421 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 PDIA4P13667 645 aaKnown RBP12.24□□□□□ -0.45
CHMP3-205ENST00000409810 SIP14410 1827 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 ATP4AP20648 1035 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 SHHQ15465 462 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 UGCGQ16739 394 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 LAMA3Q16787 3333 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 XKR3Q5GH77 459 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 MARCH8Q5T0T0 291 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 MTHFD1LQ6UB35 978 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 TRMT1LQ7Z2T5 733 aaKnown RBP12.24□□□□□ -0.45
CHMP3-205ENST00000409810 DEFB128Q7Z7B8 93 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 BANK1Q8NDB2 785 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 WNT8BQ93098 351 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHMP3-205ENST00000409810 RAB34Q9BZG1 259 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 TMEM60Q9H2L4 133 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 MYH15Q9Y2K3 1946 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
CHMP3-205ENST00000409810 ZNF862O60290 1169 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 CTSHP09668 335 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 KLRC1P26715 233 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 TMOD1P28289 359 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 EPHB4P54760 987 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 SPIRE1Q08AE8 756 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 LRIT3Q3SXY7 679 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 FAM26DQ5JW98 314 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 TMEM240Q5SV17 173 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 C9orf50Q5SZB4 431 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 IER5Q5VY09 327 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 HAUS3Q68CZ6 603 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 RUFY4Q6ZNE9 571 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 ZNF365Q70YC5 407 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 NME8Q8N427 588 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 ERMNQ8TAM6 284 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 DNAJB3Q8WWF6 145 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 HERVK_113Q902F9 699 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 MAP7D2Q96T17 732 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 JPH2Q9BR39 696 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-205ENST00000409810 LXNQ9BS40 222 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 FAM49AQ9H0Q0 323 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-205ENST00000409810 ZSWIM4Q9H7M6 989 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 FOXD4L1Q9NU39 408 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 PPME1Q9Y570 386 aa12.23□□□□□ -0.45
CHMP3-205ENST00000409810 EFCAB14O75071 495 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 BAIAP3O94812 1187 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 BMP15O95972 392 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 CXCL10P02778 98 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 SYT1P21579 422 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-205ENST00000409810 MRPS6P82932 125 aaKnown RBP12.22□□□□□ -0.45
CHMP3-205ENST00000409810 TBC1D8BQ0IIM8 1120 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms