RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 PTPROQ16827 1216 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 KNOP1Q1ED39 458 aaKnown RBP16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 EFCAB13Q8IY85 973 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 ETNPPLQ8TBG4 499 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 REEP2Q9BRK0 252 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 GLT8D2Q9H1C3 349 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 PLCB1Q9NQ66 1216 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 TMEM59LQ9UK28 342 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 MEIS2O14770 477 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 KIF4AO95239 1232 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 CPP00450 1065 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 PON1P27169 355 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 ARHGAP4P98171 946 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 NFIAQ12857 509 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 PRR16Q569H4 304 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 ZFPM1Q8IX07 1006 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 RBM46Q8TBY0 533 aaKnown RBP16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 COA1Q9GZY4 146 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 SUGT1Q9Y2Z0 365 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 LRRC37AA6NMS7 1700 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 UBR3Q6ZT12 1888 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 FAM196BA6NMK8 535 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 HLA-DOAP06340 250 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 SPATA31C1P0DKV0 1188 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 PSEN1P49768 467 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 EXOC3L4Q17RC7 722 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 C10orf76Q5T2E6 689 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 EPM2AIP1Q7L775 607 aaPredicted RBP16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 SUGP1Q8IWZ8 645 aaKnown RBP16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 CRAMP1Q96RY5 1269 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 DNAJC18Q9H819 358 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 NAGPAQ9UK23 515 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 AJAP1Q9UKB5 411 aaPredicted RBP16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 FAM169AQ9Y6X4 670 aa16.6■□□□□ 0.25
LYSMD4-204ENST00000409796 CLSTN1O94985 981 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 ADRA2BP18089 450 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 SNAP25P60880 206 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 DCAF17Q5H9S7 520 aaPredicted RBP16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 WHAMMQ8TF30 809 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 CRYGNQ8WXF5 182 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 BCAS3Q9H6U6 928 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 DNM3Q9UQ16 869 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 A0A087WUV0 522 aaPredicted RBP16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 RSPH10B2B2RC85 870 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 CES2O00748 559 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 AKAP3O75969 853 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 RSPH10BP0C881 870 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 ERVK-9P63128 1117 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 SF3B2Q13435 895 aaKnown RBP16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 ALKBH5Q6P6C2 394 aaKnown RBP16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 MOXD1Q6UVY6 613 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 TADA2BQ86TJ2 420 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 CD302Q8IX05 232 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 LRRC57Q8N9N7 239 aa16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 RNPC3Q96LT9 517 aaKnown RBP16.59■□□□□ 0.25
LYSMD4-204ENST00000409796 THSD7AQ9UPZ6 1657 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 PPEF1O14829 653 aaPredicted RBP16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 CEP104O60308 925 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 DDR1Q08345 913 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 EPHA7Q15375 998 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 DOK7Q18PE1 504 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 SLFN13Q68D06 897 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 KDM7AQ6ZMT4 941 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 GPATCH11Q8N954 259 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 SCFD2Q8WU76 684 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 FAM107BQ9H098 131 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 SIX2Q9NPC8 291 aa16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 BZW2Q9Y6E2 419 aaKnown RBP16.58■□□□□ 0.25
LYSMD4-204ENST00000409796 CALUO43852 315 aaPredicted RBP16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 XRCC5P13010 732 aaKnown RBP16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 RPA1P27694 616 aa16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 CASP4P49662 377 aa16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 AP3B2Q13367 1082 aa16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 APOBEC3HQ6NTF7 200 aaKnown RBP16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 ERMNQ8TAM6 284 aa16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 PBKQ96KB5 322 aa16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 TAF1DQ9H5J8 278 aaPredicted RBP16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 SIPA1L1O43166 1804 aa16.58■□□□□ 0.24
LYSMD4-204ENST00000409796 PDXKO00764 312 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 HSPA9P38646 679 aaKnown RBP16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 PRKCIP41743 596 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 TCERG1LQ5VWI1 586 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 GJB7Q6PEY0 223 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 SP8Q8IXZ3 490 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 PROCA1Q8NCQ7 364 aaPredicted RBP16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 DCAF4Q8WV16 495 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 LENG9Q96B70 501 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 CCDC17Q96LX7 622 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 ISCUQ9H1K1 167 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 ASTN1O14525 1302 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 NR3C1P04150 777 aa16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 ZBTB48P10074 688 aaPredicted RBP16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 HLTFQ14527 1009 aaKnown RBP eCLIP16.57■□□□□ 0.24
LYSMD4-204ENST00000409796 MMS22LQ6ZRQ5 1243 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms