RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 NPY5RQ15761 445 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 C16orf86Q6ZW13 317 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 PPP1R12CQ9BZL4 782 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 DNAJC17Q9NVM6 304 aaKnown RBP14.15□□□□□ -0.14
PTPRN-202ENST00000409251 MCM8Q9UJA3 840 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 PNMA2Q9UL42 364 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 FSBPO95073 299 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 KRT13P13646 458 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 SNX1Q13596 522 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 KCNB1Q14721 858 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 R3HDM1Q15032 1099 aaKnown RBP14.15□□□□□ -0.14
PTPRN-202ENST00000409251 CERKLQ49MI3 558 aaPredicted RBP14.15□□□□□ -0.14
PTPRN-202ENST00000409251 FAM43BQ6ZT52 329 aaPredicted RBP14.15□□□□□ -0.14
PTPRN-202ENST00000409251 FAM47EQ6ZV65 393 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 FAM133AQ8N9E0 248 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 TSGA10Q9BZW7 698 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 SH2D4AQ9H788 454 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 NOD2Q9HC29 1040 aa14.15□□□□□ -0.14
PTPRN-202ENST00000409251 H0Y3Z8 333 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 TRAF5O00463 557 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 GH2P01242 217 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 TCP11L1Q9NUJ3 509 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 ITIH6Q6UXX5 1313 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 STK36Q9NRP7 1315 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 EME2A4GXA9 379 aaPredicted RBP14.14□□□□□ -0.15
PTPRN-202ENST00000409251 DGKZQ13574 1117 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 PREPLQ4J6C6 727 aaPredicted RBP14.14□□□□□ -0.15
PTPRN-202ENST00000409251 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
PTPRN-202ENST00000409251 PARD3BQ8TEW8 1205 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 GOLGA6L10A0A0M3HER8 536 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 TMEM110-MUSTN1A8MSY1 372 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 EEF2P13639 858 aaKnown RBP14.14□□□□□ -0.15
PTPRN-202ENST00000409251 TNNC1P63316 161 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 ANKS4BQ8N8V4 417 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 NEDD1Q8NHV4 660 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 TLR10Q9BXR5 811 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 KCNK9Q9NPC2 374 aa14.14□□□□□ -0.15
PTPRN-202ENST00000409251 BRWD3Q6RI45 1802 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 KRIT1O00522 736 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 FLT3P36888 993 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 HSD17B3P37058 310 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 BAG6P46379 1132 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 IL17AQ16552 155 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 AP1ARQ63HQ0 302 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 SLC17A8Q8NDX2 589 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 TBCKQ8TEA7 893 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 RAPGEF5Q92565 580 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 SPAG5Q96R06 1193 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 DNAJC7Q99615 494 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 SAMD15Q9P1V8 674 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 THSD7AQ9UPZ6 1657 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 ANO9A1A5B4 782 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 PLCG1P19174 1290 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 ABCB4P21439 1286 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 KLRC1P26715 233 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 ECE1P42892 770 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 TTLL6Q8N841 843 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 CNKSR1Q969H4 720 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 MRRFQ96E11 262 aaKnown RBP14.13□□□□□ -0.15
PTPRN-202ENST00000409251 TMEM39BQ9GZU3 492 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 FAM237AA0A1B0GTK4 181 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 GRM4Q14833 912 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 RPS6KA1Q15418 735 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 THEMIS2Q5TEJ8 643 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 PODNQ7Z5L7 613 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 ADSSL1Q8N142 457 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 OGFOD1Q8N543 542 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 FLAD1Q8NFF5 587 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 P2RX5Q93086 422 aa14.13□□□□□ -0.15
PTPRN-202ENST00000409251 SHMT1P34896 483 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 JAG1P78504 1218 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 KDM7AQ6ZMT4 941 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 MMGT1Q8N4V1 131 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 CAMKK2Q96RR4 588 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 TRIM51Q9BSJ1 452 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 NDST4Q9H3R1 872 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 DNAJC18Q9H819 358 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 SPATS2LQ9NUQ6 558 aaKnown RBP14.12□□□□□ -0.15
PTPRN-202ENST00000409251 PCDHA6Q9UN73 950 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 G3BP2Q9UN86 482 aaKnown RBP14.12□□□□□ -0.15
PTPRN-202ENST00000409251 PCDHA8Q9Y5H6 950 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 NHSQ6T4R5 1651 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 TDP2O95551 362 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 ANP32DO95626 131 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 HOXA13P31271 388 aaPredicted RBP14.12□□□□□ -0.15
PTPRN-202ENST00000409251 KLHL30Q0D2K2 578 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 ANKRD20A8PQ5CZ79 823 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 DACT2Q5SW24 774 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 LSM14BQ9BX40 385 aaKnown RBP14.12□□□□□ -0.15
PTPRN-202ENST00000409251 DISC1Q9NRI5 854 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 FAM198AQ9UFP1 575 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 LAMB2P55268 1798 aa14.12□□□□□ -0.15
PTPRN-202ENST00000409251 A8MUI8 341 aa14.11□□□□□ -0.15
PTPRN-202ENST00000409251 FGRP09769 529 aa14.11□□□□□ -0.15
PTPRN-202ENST00000409251 EEF1GP26641 437 aaKnown RBP14.11□□□□□ -0.15
PTPRN-202ENST00000409251 SH3BP5LQ7L8J4 393 aa14.11□□□□□ -0.15
PTPRN-202ENST00000409251 ADGRF4Q8IZF3 695 aa14.11□□□□□ -0.15
PTPRN-202ENST00000409251 GDAP1Q8TB36 358 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms