RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 ANGPTL8Q6UXH0 198 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 RNF103-CHMP3A0A140T963 221 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 ARMCX2Q7L311 632 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 SLC7A3Q8WY07 619 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 PPP2R2AP63151 447 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 MYL10Q9BUA6 226 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 PPCSQ9HAB8 311 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
SHANK2-203ENST00000409161 SEC31AO94979 1220 aaKnown RBP13□□□□□ -0.33
SHANK2-203ENST00000409161 TRADDQ15628 312 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 FAM173BQ6P4H8 233 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 TTC8Q8TAM2 541 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 CCDC127Q96BQ5 260 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 DDX28Q9NUL7 540 aaKnown RBP13□□□□□ -0.33
SHANK2-203ENST00000409161 TRAF3IP3Q9Y228 551 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 SESN1Q9Y6P5 492 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 KLRF2D3W0D1 207 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 SNX2O60749 519 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 FBXO11Q86XK2 927 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 CPXCR1Q8N123 301 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13□□□□□ -0.33
SHANK2-203ENST00000409161 CALN1Q9BXU9 219 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 OCM2P0CE71 109 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 OCMP0CE72 109 aaPredicted RBP13□□□□□ -0.33
SHANK2-203ENST00000409161 POTEAQ6S8J7 498 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 ZNF555Q8NEP9 628 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 SMCR8Q8TEV9 937 aaPredicted RBP13□□□□□ -0.33
SHANK2-203ENST00000409161 GJA10Q969M2 543 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 MYH11P35749 1972 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 STAMQ92783 540 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 NR1H4Q96RI1 486 aaPredicted RBP13□□□□□ -0.33
SHANK2-203ENST00000409161 MXD3Q9BW11 206 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 BEND6Q5SZJ8 279 aaPredicted RBP13□□□□□ -0.33
SHANK2-203ENST00000409161 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
SHANK2-203ENST00000409161 TBC1D1Q86TI0 1168 aaPredicted RBP12.99□□□□□ -0.33
SHANK2-203ENST00000409161 ABL1P00519 1130 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 CALB1P05937 261 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 KHDRBS2Q5VWX1 349 aaKnown RBP12.99□□□□□ -0.33
SHANK2-203ENST00000409161 UHMK1Q8TAS1 419 aaKnown RBP12.99□□□□□ -0.33
SHANK2-203ENST00000409161 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 ANO9A1A5B4 782 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 ASAP2O43150 1006 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 PSMC1P62191 440 aaKnown RBP12.99□□□□□ -0.33
SHANK2-203ENST00000409161 ARL6IP4Q66PJ3 421 aaKnown RBP12.99□□□□□ -0.33
SHANK2-203ENST00000409161 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
SHANK2-203ENST00000409161 PBXIP1Q96AQ6 731 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 PARVGQ9HBI0 331 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 TFCP2L1Q9NZI6 479 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 GNPATO15228 680 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
SHANK2-203ENST00000409161 TERB1Q8NA31 727 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 TGS1Q96RS0 853 aaKnown RBP12.99□□□□□ -0.33
SHANK2-203ENST00000409161 CTSWP56202 376 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 INPP5AQ14642 412 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 TSPYL6Q8N831 410 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 NFU1Q9UMS0 254 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 ZNF263O14978 683 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 SOX5P35711 763 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 DTX3LQ8TDB6 740 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 MYH8P13535 1937 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 MIS18BP1Q6P0N0 1132 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 FBXO38Q6PIJ6 1188 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 ELMSAN1Q6PJG2 1045 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 RGS9BPQ6ZS82 235 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 TNIP2Q8NFZ5 429 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 KLC4Q9NSK0 619 aa12.99□□□□□ -0.33
SHANK2-203ENST00000409161 MAP4P27816 1152 aaKnown RBP12.98□□□□□ -0.33
SHANK2-203ENST00000409161 LMCD1Q9NZU5 365 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 PRDM1O75626 825 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 TBC1D9BQ66K14 1250 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 PHF21AQ96BD5 680 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 CSADQ9Y600 493 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 ABCC4O15439 1325 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 CTIFO43310 598 aaKnown RBP12.98□□□□□ -0.33
SHANK2-203ENST00000409161 WDR47O94967 919 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 SLCO1A2P46721 670 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 GUCY1A3Q02108 690 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 KLC1Q07866 573 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 DAB2IPQ5VWQ8 1189 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 OSBPL1AQ9BXW6 950 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 TMED10P49755 219 aaKnown RBP12.98□□□□□ -0.33
SHANK2-203ENST00000409161 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 HORMAD1Q86X24 394 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 TCOF1Q13428 1488 aaKnown RBP12.98□□□□□ -0.33
SHANK2-203ENST00000409161 REREQ9P2R6 1566 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 SLC30A9Q6PML9 568 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 SIX6OS1Q8N1H7 587 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 TTLL11Q8NHH1 800 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 TRIM8Q9BZR9 551 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 AP3B1O00203 1094 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 HSPA1AP0DMV8 641 aaKnown RBP12.98□□□□□ -0.33
SHANK2-203ENST00000409161 HSPA1BP0DMV9 641 aaKnown RBP12.98□□□□□ -0.33
SHANK2-203ENST00000409161 PTK2BQ14289 1009 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 SLFN12LQ6IEE8 588 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 FSD1LQ9BXM9 530 aa12.98□□□□□ -0.33
SHANK2-203ENST00000409161 TNNQ9UQP3 1299 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms