RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 ANKRD2Q9GZV1 360 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 NEUROG2Q9H2A3 272 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 AZI2Q9H6S1 392 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 ASIC3Q9UHC3 531 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 DNM3Q9UQ16 869 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNX13-201ENST00000409076 NR2E1Q9Y466 385 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 COL1A1P02452 1464 aaPredicted RBP9.08□□□□□ -0.96
SNX13-201ENST00000409076 WDR91A4D1P6 747 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 CCDC169A6NNP5 214 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 TLR2O60603 784 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 DLATP10515 647 aaKnown RBP9.08□□□□□ -0.96
SNX13-201ENST00000409076 EPB41P11171 864 aaKnown RBP9.08□□□□□ -0.96
SNX13-201ENST00000409076 SESN3P58005 492 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 UAP1Q16222 522 aaPredicted RBP9.08□□□□□ -0.96
SNX13-201ENST00000409076 CYP4F22Q6NT55 531 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 ZNF571Q7Z3V5 609 aaPredicted RBP9.08□□□□□ -0.96
SNX13-201ENST00000409076 DGKHQ86XP1 1220 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 POP1Q99575 1024 aaKnown RBP9.08□□□□□ -0.96
SNX13-201ENST00000409076 CD209Q9NNX6 404 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 PLAGL2Q9UPG8 496 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 FLT1P17948 1338 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.07□□□□□ -0.96
SNX13-201ENST00000409076 GCLMP48507 274 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 QPCTQ16769 361 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 QRICH1Q2TAL8 776 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 METTL13Q8N6R0 699 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 SLC30A5Q8TAD4 765 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 UTP11Q9Y3A2 253 aaKnown RBP9.07□□□□□ -0.96
SNX13-201ENST00000409076 EP400Q96L91 3159 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 A0A1W2PQC6 194 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 GRID2IPA4D2P6 1211 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 MYCLP12524 364 aaPredicted RBP9.07□□□□□ -0.96
SNX13-201ENST00000409076 HSD17B3P37058 310 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 GSTO1P78417 241 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 TUBB2AQ13885 445 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 SLFN13Q68D06 897 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 WDR93Q6P2C0 686 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 TUBB2BQ9BVA1 445 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 ATP6V0A2Q9Y487 856 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 CTDP1Q9Y5B0 961 aaPredicted RBP9.07□□□□□ -0.96
SNX13-201ENST00000409076 COL5A2P05997 1499 aaPredicted RBP9.07□□□□□ -0.96
SNX13-201ENST00000409076 ORC4O43929 436 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 SERPING1P05155 500 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 HLA-DOAP06340 250 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 UBAP2Q5T6F2 1119 aaKnown RBP9.07□□□□□ -0.96
SNX13-201ENST00000409076 FBXO33Q7Z6M2 555 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 PASD1Q8IV76 773 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 C1orf54Q8WWF1 131 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 N4BP2L2Q92802 583 aaPredicted RBP9.07□□□□□ -0.96
SNX13-201ENST00000409076 REEP2Q9BRK0 252 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 FAM167BQ9BTA0 163 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 CCSER1Q9C0I3 900 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 TAS2R14Q9NYV8 317 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 AMFRQ9UKV5 643 aa9.07□□□□□ -0.96
SNX13-201ENST00000409076 CHD2O14647 1828 aaKnown RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 CLNS1AP54105 237 aaKnown RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 PRKG1Q13976 671 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 CDC37Q16543 378 aaPredicted RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 LLGL2Q6P1M3 1020 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 MMS22LQ6ZRQ5 1243 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 RFX8Q6ZV50 586 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 ZNF512BQ96KM6 892 aaPredicted RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 DDX4Q9NQI0 724 aaKnown RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 AJAP1Q9UKB5 411 aaPredicted RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 LMO7Q8WWI1 1683 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 PLEKHG2Q9H7P9 1386 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 H0Y3Z8 333 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 KIF4AO95239 1232 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 STAT1P42224 750 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 PLCB3Q01970 1234 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 ODR4Q5SWX8 454 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 MICALCLQ6ZW33 695 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 B4GALNT4Q76KP1 1039 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 KIFC3Q9BVG8 833 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 ANO3Q9BYT9 981 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 UBE2TQ9NPD8 197 aaPredicted RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 TTC7AQ9ULT0 858 aaPredicted RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 PGRMC1O00264 195 aaKnown RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 RGS16O15492 202 aaPredicted RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 PPP1R37O75864 691 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 SHBGP04278 402 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 MARCKSL1P49006 195 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 GALCP54803 685 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 GSTA5Q7RTV2 222 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 CACNA2D3Q8IZS8 1091 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 ZNF526Q8TF50 670 aaPredicted RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 AENQ8WTP8 325 aaKnown RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 ACSF2Q96CM8 615 aaPredicted RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 SAAL1Q96ER3 474 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 RUSC1Q9BVN2 902 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 JMJD4Q9H9V9 463 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 ALG13Q9NP73 1137 aaKnown RBP9.06□□□□□ -0.96
SNX13-201ENST00000409076 SERPINB13Q9UIV8 391 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 SIK3Q9Y2K2 1263 aa9.06□□□□□ -0.96
SNX13-201ENST00000409076 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 KAT6AQ92794 2004 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 LRRC10BA6NIK2 292 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 FLOT1O75955 427 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 AFPP02771 609 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms