RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 CCDC60Q8IWA6 550 aaPredicted RBP20.94■□□□□ 0.94
PTPN18-203ENST00000409022 BBXQ8WY36 941 aaPredicted RBP20.94■□□□□ 0.94
PTPN18-203ENST00000409022 NAP1L4Q99733 375 aaKnown RBP20.94■□□□□ 0.94
PTPN18-203ENST00000409022 TSPYL2Q9H2G4 693 aaPredicted RBP20.94■□□□□ 0.94
PTPN18-203ENST00000409022 MAFBQ9Y5Q3 323 aaPredicted RBP20.94■□□□□ 0.94
PTPN18-203ENST00000409022 CDY2AQ9Y6F7 541 aa20.94■□□□□ 0.94
PTPN18-203ENST00000409022 DOCK5Q9H7D0 1870 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 MSH4O15457 936 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 GHRP10912 638 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 MGAT3Q09327 533 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 TCTN1Q2MV58 587 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 LRCH2Q5VUJ6 765 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 MTHFD1LQ6UB35 978 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.93■□□□□ 0.94
PTPN18-203ENST00000409022 TSHZ1Q6ZSZ6 1077 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 ARNTL2Q8WYA1 636 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 LENG9Q96B70 501 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 ORC3Q9UBD5 711 aaPredicted RBP20.93■□□□□ 0.94
PTPN18-203ENST00000409022 TRPV2Q9Y5S1 764 aa20.93■□□□□ 0.94
PTPN18-203ENST00000409022 CYP3A7-CYP3A51PA0A087WV96 503 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 CYP3A7P24462 503 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 KLRC1P26715 233 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 ODR4Q5SWX8 454 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 FAM117BQ6P1L5 589 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 RDM1Q8NG50 284 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 SLC5A5Q92911 643 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 GTF3C6Q969F1 213 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 AIFM3Q96NN9 605 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 UIMC1Q96RL1 719 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 TGS1Q96RS0 853 aaKnown RBP20.92■□□□□ 0.94
PTPN18-203ENST00000409022 YME1L1Q96TA2 773 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 PHF20Q9BVI0 1012 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 FTHL17Q9BXU8 183 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 DISC1Q9NRI5 854 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 NRBP2Q9NSY0 501 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 GABBR1Q9UBS5 961 aa20.92■□□□□ 0.94
PTPN18-203ENST00000409022 M0R2N6 131 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 MKRN4PQ13434 485 aaPredicted RBP20.91■□□□□ 0.94
PTPN18-203ENST00000409022 ADGRE1Q14246 886 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 LPIN1Q14693 890 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 FBXO47Q5MNV8 452 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 TMCO2Q7Z6W1 182 aaPredicted RBP20.91■□□□□ 0.94
PTPN18-203ENST00000409022 TET1Q8NFU7 2136 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 PPM1EQ8WY54 764 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 TOP1MTQ969P6 601 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 CERS4Q9HA82 394 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 KCNJ14Q9UNX9 436 aa20.91■□□□□ 0.94
PTPN18-203ENST00000409022 MAGEB2O15479 319 aa20.9■□□□□ 0.94
PTPN18-203ENST00000409022 GCFC2P16383 781 aaKnown RBP20.9■□□□□ 0.94
PTPN18-203ENST00000409022 TRIM29Q14134 588 aa20.9■□□□□ 0.94
PTPN18-203ENST00000409022 NEK8Q86SG6 692 aa20.9■□□□□ 0.94
PTPN18-203ENST00000409022 ZNF710Q8N1W2 664 aa20.9■□□□□ 0.94
PTPN18-203ENST00000409022 TRAPPC12Q8WVT3 735 aa20.9■□□□□ 0.94
PTPN18-203ENST00000409022 SAMD11Q96NU1 681 aa20.9■□□□□ 0.94
PTPN18-203ENST00000409022 CELF4Q9BZC1 486 aaKnown RBP20.9■□□□□ 0.94
PTPN18-203ENST00000409022 DDX25Q9UHL0 483 aaKnown RBP20.9■□□□□ 0.94
PTPN18-203ENST00000409022 KDM3AQ9Y4C1 1321 aa20.89■□□□□ 0.93
PTPN18-203ENST00000409022 LCHNA4D1U4 455 aa20.89■□□□□ 0.93
PTPN18-203ENST00000409022 CHMP2AO43633 222 aa20.89■□□□□ 0.93
PTPN18-203ENST00000409022 POU3F3P20264 500 aaPredicted RBP20.89■□□□□ 0.93
PTPN18-203ENST00000409022 TMOD1P28289 359 aa20.89■□□□□ 0.93
PTPN18-203ENST00000409022 HTRA4P83105 476 aaPredicted RBP20.89■□□□□ 0.93
PTPN18-203ENST00000409022 PAK2Q13177 524 aa20.89■□□□□ 0.93
PTPN18-203ENST00000409022 ME3Q16798 604 aa20.89■□□□□ 0.93
PTPN18-203ENST00000409022 INF2Q27J81 1249 aa20.89■□□□□ 0.93
PTPN18-203ENST00000409022 LETM2Q2VYF4 491 aa20.89■□□□□ 0.93
PTPN18-203ENST00000409022 IGSF9BQ9UPX0 1349 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 LINC01553A4QN01 128 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 DLL1O00548 723 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 MARCH6O60337 910 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 UPP2O95045 317 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 TDP2O95551 362 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 KRT2P35908 639 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 ERVK-21P61565 698 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 NPY5RQ15761 445 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 MIER3Q7Z3K6 550 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 NECAB1Q8N987 351 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 MBOAT7Q96N66 472 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
PTPN18-203ENST00000409022 CDH23Q9H251 3354 aa20.88■□□□□ 0.93
PTPN18-203ENST00000409022 KAT6AQ92794 2004 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.87■□□□□ 0.93
PTPN18-203ENST00000409022 PSMD10O75832 226 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 CTDNEP1O95476 244 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 OATP04181 439 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 TMEM62Q0P6H9 643 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 PPP4R3AQ6IN85 833 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 TRMT1LQ7Z2T5 733 aaKnown RBP20.87■□□□□ 0.93
PTPN18-203ENST00000409022 MICALL1Q8N3F8 863 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 METTL13Q8N6R0 699 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 ZBTB10Q96DT7 871 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 FAM20AQ96MK3 541 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 MAP7D2Q96T17 732 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 UNC45AQ9H3U1 944 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 LMCD1Q9NZU5 365 aa20.87■□□□□ 0.93
PTPN18-203ENST00000409022 CHD9Q3L8U1 2897 aa20.86■□□□□ 0.93
PTPN18-203ENST00000409022 EDIL3O43854 480 aa20.86■□□□□ 0.93
PTPN18-203ENST00000409022 DKC1O60832 514 aaKnown RBP eCLIP20.86■□□□□ 0.93
PTPN18-203ENST00000409022 SEC24BO95487 1268 aa20.86■□□□□ 0.93
PTPN18-203ENST00000409022 ATP4AP20648 1035 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms