RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 NKX3-2P78367 333 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 ADAM9Q13443 819 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 MOGSQ13724 837 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 TARBP2Q15633 366 aaKnown RBP8.68□□□□□ -1.02
PTPN12-202ENST00000407343 PLEKHG6Q3KR16 790 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 CBARPQ8N350 705 aaPredicted RBP8.68□□□□□ -1.02
PTPN12-202ENST00000407343 DDX11Q96FC9 970 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 ZNF496Q96IT1 587 aaPredicted RBP8.68□□□□□ -1.02
PTPN12-202ENST00000407343 SCYL1Q96KG9 808 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 NOX5Q96PH1 765 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 YIPF4Q9BSR8 244 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 PUS7LQ9H0K6 701 aaKnown RBP8.68□□□□□ -1.02
PTPN12-202ENST00000407343 EPB41L4AQ9HCS5 686 aaPredicted RBP8.68□□□□□ -1.02
PTPN12-202ENST00000407343 SLC39A2Q9NP94 309 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 NGRNQ9NPE2 291 aaKnown RBP8.68□□□□□ -1.02
PTPN12-202ENST00000407343 ASB1Q9Y576 335 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
PTPN12-202ENST00000407343 SESN3P58005 492 aa8.67□□□□□ -1.02
PTPN12-202ENST00000407343 PFKPQ01813 784 aa8.67□□□□□ -1.02
PTPN12-202ENST00000407343 INAVAQ3KP66 663 aa8.67□□□□□ -1.02
PTPN12-202ENST00000407343 TMC5Q6UXY8 1006 aa8.67□□□□□ -1.02
PTPN12-202ENST00000407343 HDGFL2Q7Z4V5 671 aaPredicted RBP8.67□□□□□ -1.02
PTPN12-202ENST00000407343 RASSF3Q86WH2 238 aa8.67□□□□□ -1.02
PTPN12-202ENST00000407343 CNTD1Q8N815 330 aa8.67□□□□□ -1.02
PTPN12-202ENST00000407343 RTF1Q92541 710 aaKnown RBP8.67□□□□□ -1.02
PTPN12-202ENST00000407343 ZDHHC5Q9C0B5 715 aa8.67□□□□□ -1.02
PTPN12-202ENST00000407343 TOPORSQ9NS56 1045 aaPredicted RBP8.67□□□□□ -1.02
PTPN12-202ENST00000407343 ETV2O00321 342 aaPredicted RBP8.66□□□□□ -1.02
PTPN12-202ENST00000407343 NFIBO00712 420 aa8.66□□□□□ -1.02
PTPN12-202ENST00000407343 PLA2G1BP04054 148 aaKnown RBP8.66□□□□□ -1.02
PTPN12-202ENST00000407343 MED14OSP0DP75 135 aa8.66□□□□□ -1.02
PTPN12-202ENST00000407343 CYP2C8P10632 490 aa8.66□□□□□ -1.02
PTPN12-202ENST00000407343 LSP1P33241 339 aa8.66□□□□□ -1.02
PTPN12-202ENST00000407343 HTRA3P83110 453 aa8.66□□□□□ -1.02
PTPN12-202ENST00000407343 EXOSC10Q01780 885 aaKnown RBP8.66□□□□□ -1.02
PTPN12-202ENST00000407343 PDCD1Q15116 288 aa8.66□□□□□ -1.02
PTPN12-202ENST00000407343 ZC3H18Q86VM9 953 aaKnown RBP8.66□□□□□ -1.02
PTPN12-202ENST00000407343 CMIPQ8IY22 773 aa8.66□□□□□ -1.02
PTPN12-202ENST00000407343 LINC00482Q8N8I6 264 aa8.66□□□□□ -1.02
PTPN12-202ENST00000407343 CCDC8Q9H0W5 538 aaPredicted RBP8.66□□□□□ -1.02
PTPN12-202ENST00000407343 IL18BPO95998 194 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 PRLP01236 227 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 PTGS1P23219 599 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 GLDCP23378 1020 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 LIMS1P48059 325 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 FOXO4P98177 505 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 IQSEC1Q6DN90 963 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 FERMT3Q86UX7 667 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 PASD1Q8IV76 773 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 IRF2BPLQ9H1B7 796 aa8.65□□□□□ -1.02
PTPN12-202ENST00000407343 PRAMEF22A3QJZ6 481 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 GABRDO14764 452 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 ENO2P09104 434 aaPredicted RBP8.64□□□□□ -1.03
PTPN12-202ENST00000407343 PFKLP17858 780 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 CD40P25942 277 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 ALDH6A1Q02252 535 aaKnown RBP8.64□□□□□ -1.03
PTPN12-202ENST00000407343 MYBPC3Q14896 1274 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 SKIDA1Q1XH10 827 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 PRAMEF18Q5VWM3 479 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 VASNQ6EMK4 673 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 LRSAM1Q6UWE0 723 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 STK32CQ86UX6 486 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 ZZZ3Q8IYH5 903 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 IGDCC4Q8TDY8 1250 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 C11orf84Q9BUA3 381 aaPredicted RBP8.64□□□□□ -1.03
PTPN12-202ENST00000407343 UCKL1Q9NWZ5 548 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
PTPN12-202ENST00000407343 ELL2O00472 640 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-202ENST00000407343 DLX2Q07687 328 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-202ENST00000407343 SSPNQ14714 243 aa8.63□□□□□ -1.03
PTPN12-202ENST00000407343 PHF19Q5T6S3 580 aa8.63□□□□□ -1.03
PTPN12-202ENST00000407343 TMEM132EQ6IEE7 984 aa8.63□□□□□ -1.03
PTPN12-202ENST00000407343 ERCC4Q92889 916 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-202ENST00000407343 FOXB1Q99853 325 aa8.63□□□□□ -1.03
PTPN12-202ENST00000407343 MENTQ9BUN1 341 aa8.63□□□□□ -1.03
PTPN12-202ENST00000407343 INCENPQ9NQS7 918 aa8.63□□□□□ -1.03
PTPN12-202ENST00000407343 DLL4Q9NR61 685 aa8.63□□□□□ -1.03
PTPN12-202ENST00000407343 FZD9O00144 591 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 ZBTB41Q5SVQ8 909 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 SYDE2Q5VT97 1194 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 SYDE1Q6ZW31 735 aaPredicted RBP8.62□□□□□ -1.03
PTPN12-202ENST00000407343 KANSL1Q7Z3B3 1105 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 FAM129CQ86XR2 697 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 HIPK4Q8NE63 616 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 LMBR1Q8WVP7 490 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 KCNN1Q92952 543 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 TMEM209Q96SK2 561 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 KCND1Q9NSA2 647 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 GALNT8Q9NY28 637 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 USP36Q9P275 1121 aaKnown RBP8.62□□□□□ -1.03
PTPN12-202ENST00000407343 ARHGAP28Q9P2N2 729 aa8.62□□□□□ -1.03
PTPN12-202ENST00000407343 THRAP3Q9Y2W1 955 aaKnown RBP8.62□□□□□ -1.03
PTPN12-202ENST00000407343 UBA6A0AVT1 1052 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-202ENST00000407343 KDM1AO60341 852 aa8.61□□□□□ -1.03
PTPN12-202ENST00000407343 COL6A1P12109 1028 aa8.61□□□□□ -1.03
PTPN12-202ENST00000407343 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
PTPN12-202ENST00000407343 ADCY1Q08828 1119 aa8.61□□□□□ -1.03
PTPN12-202ENST00000407343 STILQ15468 1287 aa8.61□□□□□ -1.03
PTPN12-202ENST00000407343 PRR31Q5SQ13 230 aa8.61□□□□□ -1.03
PTPN12-202ENST00000407343 KANK2Q63ZY3 851 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms