RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 REEP2Q9BRK0 252 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 POLR3CQ9BUI4 534 aaPredicted RBP14.95□□□□□ -0.02
PMS2-204ENST00000406569 FAM107BQ9H098 131 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 EPB41L5Q9HCM4 733 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 SIX2Q9NPC8 291 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 MPHOSPH10O00566 681 aaKnown RBP14.95□□□□□ -0.02
PMS2-204ENST00000406569 KIF4AO95239 1232 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 CPP00450 1065 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 CYP3A4P08684 503 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 EEF2P13639 858 aaKnown RBP14.95□□□□□ -0.02
PMS2-204ENST00000406569 HSPA9P38646 679 aaKnown RBP14.95□□□□□ -0.02
PMS2-204ENST00000406569 PSMC6P62333 389 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 NFIAQ12857 509 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 SLC15A2Q16348 729 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 EXOC3L4Q17RC7 722 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 SLC27A3Q5K4L6 730 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 TATDN1Q6P1N9 297 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 SLFN11Q7Z7L1 901 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 GMCL1P1Q8NEA9 526 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 ACTRT1Q8TDG2 376 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 BORCS6Q96GS4 357 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 GMCL1Q96IK5 515 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 ZC3H12CQ9C0D7 883 aaKnown RBP14.95□□□□□ -0.02
PMS2-204ENST00000406569 NAGPAQ9UK23 515 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 VAV3Q9UKW4 847 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 NFU1Q9UMS0 254 aa14.95□□□□□ -0.02
PMS2-204ENST00000406569 ASTN1O14525 1302 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 F8W031 263 aaPredicted RBP14.94□□□□□ -0.02
PMS2-204ENST00000406569 RIMBP2O15034 1052 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 FAM153BP0C7A2 387 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 ACTN1P12814 892 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 SLC9A1P19634 815 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 EPS15P42566 896 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 NPEPPSP55786 919 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 FKBP1AP62942 108 aaKnown RBP14.94□□□□□ -0.02
PMS2-204ENST00000406569 GUCY2DQ02846 1103 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 RPS6KA1Q15418 735 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 FAM153CQ494X1 144 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 CFAP58Q5T655 872 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 KDM7AQ6ZMT4 941 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 RBM46Q8TBY0 533 aaKnown RBP14.94□□□□□ -0.02
PMS2-204ENST00000406569 RUFY1Q96T51 708 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 KRT12Q99456 494 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.94□□□□□ -0.02
PMS2-204ENST00000406569 AMNQ9BXJ7 453 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 IDI2Q9BXS1 227 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 OLFML3Q9NRN5 406 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 FAM153AQ9UHL3 310 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 LOXHD1Q8IVV2 1947 aa14.94□□□□□ -0.02
PMS2-204ENST00000406569 COL11A2P13942 1736 aaPredicted RBP14.93□□□□□ -0.02
PMS2-204ENST00000406569 ZNF233A6NK53 670 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 SRRM3A6NNA2 597 aaPredicted RBP14.93□□□□□ -0.02
PMS2-204ENST00000406569 ZEB2O60315 1214 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 EYA4O95677 639 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 GAP43P17677 238 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 RPL13P26373 211 aaKnown RBP14.93□□□□□ -0.02
PMS2-204ENST00000406569 CRKP46108 304 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 SCNN1DP51172 638 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 HDLBPQ00341 1268 aaKnown RBP14.93□□□□□ -0.02
PMS2-204ENST00000406569 BTNL9Q6UXG8 535 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 RASGEF1CQ8N431 466 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 TAF4BQ92750 862 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 SLC35C1Q96A29 364 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 ISCUQ9H1K1 167 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 STXBP5LQ9Y2K9 1186 aa14.93□□□□□ -0.02
PMS2-204ENST00000406569 ZSCAN5CA6NGD5 496 aaPredicted RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 EIF3DO15371 548 aaKnown RBP eCLIP14.92□□□□□ -0.02
PMS2-204ENST00000406569 RAD51CO43502 376 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 AKAP3O75969 853 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 NR3C1P04150 777 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 XRCC5P13010 732 aaKnown RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 GNGT1P63211 74 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 PABPC4Q13310 644 aaKnown RBP eCLIP14.92□□□□□ -0.02
PMS2-204ENST00000406569 CUL1Q13616 776 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 PRR16Q569H4 304 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 ALKBH5Q6P6C2 394 aaKnown RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 LRIG3Q6UXM1 1119 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 FBXO11Q86XK2 927 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 EFCAB13Q8IY85 973 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 TPCN2Q8NHX9 752 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 OLIG1Q8TAK6 271 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 CCDC43Q96MW1 224 aaKnown RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 SPAG5Q96R06 1193 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 TRIM34Q9BYJ4 488 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 TAF1DQ9H5J8 278 aaPredicted RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 PI4KBQ9UBF8 816 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 ATXN2Q99700 1313 aaKnown RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 FAM86B1E9PN63 330 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 MSH4O15457 936 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 FLOT1O75955 427 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 FAM86B2P0C5J1 330 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 ARID5AQ03989 594 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 CERKLQ49MI3 558 aaPredicted RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 TMEM179Q6ZVK1 233 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 PPM1EQ8WY54 764 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 GJD4Q96KN9 370 aaPredicted RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 PAGR1Q9BTK6 254 aa14.92□□□□□ -0.02
PMS2-204ENST00000406569 SUCLA2Q9P2R7 463 aaPredicted RBP14.92□□□□□ -0.02
PMS2-204ENST00000406569 FAM198AQ9UFP1 575 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms