RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 KCNF1Q9H3M0 494 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 MID2Q9UJV3 735 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 PVALEFA0A1B0GWK0 134 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 GOLGA8CPA6NN73 597 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 BMP3P12645 472 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 PIH1D3Q9NQM4 214 aaKnown RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 CAPN11Q9UMQ6 739 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 UBN2Q6ZU65 1347 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 MEIS1O00470 390 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 GYG2O15488 501 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 USP17L8P0C7I0 530 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 HSPA8P11142 646 aaKnown RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 TFDP1Q14186 410 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 NAA30Q147X3 362 aaPredicted RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 ATP6V1G3Q96LB4 118 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 LRRC53A6NM62 1247 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 RASA4BC9J798 803 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 RASA4O43374 803 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 ZNF449Q6P9G9 518 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 DARS2Q6PI48 645 aaKnown RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 SGMS1Q86VZ5 419 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 USP42Q9H9J4 1324 aaKnown RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 PNPLA6Q8IY17 1366 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 ART3Q13508 389 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 PLCB4Q15147 1175 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 KRT39Q6A163 491 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 TTLL11Q8NHH1 800 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■■■■ 61.9
SNED1-205ENST00000405547 MAML1Q92585 1016 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 CALN1Q9BXU9 219 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 TRIM55Q9BYV6 548 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 STOML1Q9UBI4 398 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.35□□□□□ -0.11
SNED1-205ENST00000405547 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
SNED1-205ENST00000405547 TMEM60Q9H2L4 133 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 ORC6Q9Y5N6 252 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 STX1BP61266 288 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 MB21D2Q8IYB1 491 aaPredicted RBP14.35□□□□□ -0.11
SNED1-205ENST00000405547 HDAC11Q96DB2 347 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 SEC31BQ9NQW1 1179 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 KCNH2Q12809 1159 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 SURF1Q15526 300 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 SPATA4Q8NEY3 305 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 WDR24Q96S15 920 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 TRIM56Q9BRZ2 755 aaKnown RBP14.35□□□□□ -0.11
SNED1-205ENST00000405547 SLITRK6Q9H5Y7 841 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 IQGAP1P46940 1657 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 MX2P20592 715 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 GFPT1Q06210 699 aaPredicted RBP14.35□□□□□ -0.11
SNED1-205ENST00000405547 TAB3Q8N5C8 712 aaPredicted RBP14.35□□□□□ -0.11
SNED1-205ENST00000405547 ALKQ9UM73 1620 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 ZRANB2O95218 330 aaKnown RBP eCLIP14.35□□□□□ -0.11
SNED1-205ENST00000405547 IGKV5-2P06315 115 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 GPC5P78333 572 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 CYB5R4Q7L1T6 521 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 RAB44Q7Z6P3 723 aaPredicted RBP14.35□□□□□ -0.11
SNED1-205ENST00000405547 EDEM3Q9BZQ6 932 aa14.35□□□□□ -0.11
SNED1-205ENST00000405547 MYH10P35580 1976 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 PI4KBQ9UBF8 816 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 USP17L3A6NCW0 530 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 USP17L4A6NCW7 530 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 TRIM49BA6NDI0 452 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 TLR3O15455 904 aaKnown RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 KCNB1Q14721 858 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 LRRC23Q53EV4 343 aaPredicted RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 E4F1Q66K89 784 aaPredicted RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 NFRKBQ6P4R8 1299 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 RASGRP2Q7LDG7 609 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 USP17L1Q7RTZ2 530 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 CACYBPQ9HB71 228 aaKnown RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 BBOX1O75936 387 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 KRT37O76014 449 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 LLGL1Q15334 1064 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 SHC4Q6S5L8 630 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 BZW1Q7L1Q6 419 aaKnown RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 SAAL1Q96ER3 474 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 PCIF1Q9H4Z3 704 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 SMYD2Q9NRG4 433 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 PALLDQ8WX93 1383 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 FAM83BQ5T0W9 1011 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 SYT2Q8N9I0 419 aaPredicted RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 TRAIPQ9BWF2 469 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 TLK1Q9UKI8 766 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 CDK8P49336 464 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 POLE2P56282 527 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 TBC1D10CQ8IV04 446 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 BSDC1Q9NW68 430 aaPredicted RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 CYP2D7A0A087X1C5 515 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 TOM1L1O75674 476 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 GGPS1O95749 300 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 ATP2C1P98194 919 aaPredicted RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 AP3B2Q13367 1082 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 GUF1Q8N442 669 aaKnown RBP14.34□□□□□ -0.11
SNED1-205ENST00000405547 NEDD4P46934 1319 aa14.34□□□□□ -0.11
SNED1-205ENST00000405547 CTIFO43310 598 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms