RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CDK11BP21127 795 aaKnown RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 ADCYAP1R1P41586 468 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 COASYQ13057 564 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 PAK1Q13153 545 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 GIT2Q14161 759 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 HSDL1Q3SXM5 330 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 PRAMEF19Q5SWL8 479 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 PADI6Q6TGC4 694 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 METTL7BQ6UX53 244 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 GIMAP8Q8ND71 665 aaPredicted RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 GLIS3Q8NEA6 775 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 SCFD2Q8WU76 684 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 GLG1Q92896 1179 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ATP6V0A1Q93050 837 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 BPIFA3Q9BQP9 254 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 TINF2Q9BSI4 451 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ARHGAP39Q9C0H5 1083 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ZNF302Q9NR11 478 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 SEPT9Q9UHD8 586 aaPredicted RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 SYNRGQ9UMZ2 1314 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 LCTP09848 1927 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 DNAH12Q6ZR08 3092 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 TRIM49BA6NDI0 452 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 RASSF10A6NK89 507 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 PSMA7O14818 248 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ZNF862O60290 1169 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 FAM13AO94988 1023 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 SNAI1O95863 264 aaPredicted RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 ALDH1A1P00352 501 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 SUPT20HL2P0C7V6 817 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ATP1A3P13637 1013 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 MARK3P27448 753 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ERCC5P28715 1186 aaPredicted RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 CYP2C19P33261 490 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 TCF7P36402 384 aaPredicted RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 PSMC4P43686 418 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 PRKCEQ02156 737 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 MAP2K5Q13163 448 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 NCAPHQ15003 741 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 CCL14Q16627 93 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 FAM26FQ5R3K3 315 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 KCNV1Q6PIU1 500 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ABHD15Q6UXT9 468 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 TRIM50Q86XT4 487 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 C4orf19Q8IY42 314 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 DRC7Q8IY82 874 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ADSSL1Q8N142 457 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 MYCT1Q8N699 235 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 KIAA0895Q8NCT3 520 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 CEP170P1Q96L14 293 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 AZI2Q9H6S1 392 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 MRPL44Q9H9J2 332 aaKnown RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 SAMSN1Q9NSI8 373 aaKnown RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 ZNFX1Q9P2E3 1918 aaKnown RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 IKBKBO14920 756 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 SERPINC1P01008 464 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 MUTP22033 750 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 RARRES1P49788 294 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 PMS1P54277 932 aaKnown RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 CELF3Q5SZQ8 465 aaKnown RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 MORN1Q5T089 497 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 FAM102BQ5T8I3 360 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 C1orf186Q6ZWK4 172 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 ANO5Q75V66 913 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 OTUD6AQ7L8S5 288 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 SFR1Q86XK3 245 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 NELFCDQ8IXH7 590 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 SPC24Q8NBT2 197 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 RDM1Q8NG50 284 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 SEPT1Q8WYJ6 367 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 TRIM47Q96LD4 638 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 MED15Q96RN5 788 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 FGFBP2Q9BYJ0 223 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 VTA1Q9NP79 307 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 COL4A3BPQ9Y5P4 624 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 SYNGAP1Q96PV0 1343 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 GSTTP1A0A1W2PQM5 241 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 HIP1RO75146 1068 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 CTGFP29279 349 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 RGS2P41220 211 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 VEGFBP49765 207 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 STAT5BP51692 787 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 FCGRTP55899 365 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 CHMP4BP1P59074 171 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 ACVR2BQ13705 512 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 CCDC144BQ3MJ40 725 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 MTERF2Q49AM1 385 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 ODR4Q5SWX8 454 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 TAPT1Q6NXT6 567 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 CCDC62Q6P9F0 684 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 KCTD17Q8N5Z5 321 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 ENOX1Q8TC92 643 aaKnown RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 MORC4Q8TE76 937 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 ABHD16BQ9H3Z7 469 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 PARVGQ9HBI0 331 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 GPRC5CQ9NQ84 441 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 FLRT1Q9NZU1 646 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 DOCK5Q9H7D0 1870 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 LOC102724159A0A0B4J2E5 919 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms