RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TBC1D10BQ4KMP7 808 aaPredicted RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 ZC2HC1CQ53FD0 456 aaPredicted RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 PPP4R3AQ6IN85 833 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 PEX26Q7Z412 305 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 CERS5Q8N5B7 392 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 ANO3Q9BYT9 981 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 NOC2LQ9Y3T9 749 aaKnown RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 COL16A1Q07092 1604 aaPredicted RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 GOLGA6L10A6NI86 522 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 RBAK-RBAKDNI3L0D1 243 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 GDF11O95390 407 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 RBM5P52756 815 aaKnown RBP eCLIP13.1□□□□□ -0.31
RBM39-206ENST00000403542 COG2Q14746 738 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 GBP6Q6ZN66 633 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 TRIM51Q9BSJ1 452 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 LRRC27Q9C0I9 530 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 GOPCQ9HD26 462 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 GCNT4Q9P109 453 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 FBXL5Q9UKA1 691 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 DDX60LQ5H9U9 1706 aaKnown RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 SHMT1P34896 483 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 PDE4CQ08493 712 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 UAP1Q16222 522 aaPredicted RBP13.09□□□□□ -0.31
RBM39-206ENST00000403542 ATP6V1G3Q96LB4 118 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 CCT8L2Q96SF2 557 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 RUSC1Q9BVN2 902 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 NT5C3AQ9H0P0 336 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
RBM39-206ENST00000403542 LAMB2P55268 1798 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 PPP1R37O75864 691 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 AFPP02771 609 aaKnown RBP13.09□□□□□ -0.31
RBM39-206ENST00000403542 CTTNQ14247 550 aaKnown RBP13.09□□□□□ -0.31
RBM39-206ENST00000403542 ARHGAP44Q17R89 818 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 AADACL2Q6P093 401 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 ZNF473Q8WTR7 871 aaKnown RBP13.09□□□□□ -0.31
RBM39-206ENST00000403542 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
RBM39-206ENST00000403542 FAM86B1E9PN63 330 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 LRRN2O75325 713 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 FAM86B2P0C5J1 330 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 NMT1P30419 496 aaKnown RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 SLC12A3P55017 1021 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 GIT2Q14161 759 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 GLE1Q53GS7 698 aaKnown RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 CEP63Q96MT8 703 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 AIPL1Q9NZN9 384 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 STRCQ7RTU9 1775 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 ABCB11O95342 1321 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 TMEM110-MUSTN1A8MSY1 372 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 G3V3G9 751 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 GCOM1H8Y6P7 765 aaPredicted RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 MYZAPP0CAP1 466 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 TRIM49P0CI25 452 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 TRIM49CP0CI26 452 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 EPB41P11171 864 aaKnown RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 EEF2P13639 858 aaKnown RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 HNRNPH1P31943 449 aaKnown RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 CLK2P49760 499 aaKnown RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 CYP2J2P51589 502 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 ARHGAP4P98171 946 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 KNOP1Q1ED39 458 aaKnown RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 NLRP14Q86W24 1093 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 GPATCH11Q8N954 259 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 MDM1Q8TC05 714 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 NOVA2Q9UNW9 492 aaKnown RBP13.08□□□□□ -0.32
RBM39-206ENST00000403542 DNM3Q9UQ16 869 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 ATP8A1Q9Y2Q0 1164 aa13.08□□□□□ -0.32
RBM39-206ENST00000403542 KDM4FA0A1W2PPD8 638 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 TLDC2A0PJX2 215 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 FGGP02679 453 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 SERPINB2P05120 415 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 ECHS1P30084 290 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 MDH1P40925 334 aaKnown RBP13.07□□□□□ -0.32
RBM39-206ENST00000403542 GABPAQ06546 454 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 PTGISQ16647 500 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 KCNV1Q6PIU1 500 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 GLG1Q92896 1179 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 NUCKS1Q9H1E3 243 aaKnown RBP13.07□□□□□ -0.32
RBM39-206ENST00000403542 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
RBM39-206ENST00000403542 NAV1Q8NEY1 1877 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 PGRMC1O00264 195 aaKnown RBP13.07□□□□□ -0.32
RBM39-206ENST00000403542 NR3C1P04150 777 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 SNHG28P0DPA3 235 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 IL1R1P14778 569 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 ZNF76P36508 570 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 USP11P51784 963 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 SKOR1P84550 965 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 PALB2Q86YC2 1186 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 TPCN2Q8NHX9 752 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 MYCBPAPQ8TBZ2 947 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 ELMO3Q96BJ8 720 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 SH2D3AQ9BRG2 576 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 EPN3Q9H201 632 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms