RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 CRACR2BQ8N4Y2 399 aaPredicted RBP8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 SPATA5Q8NB90 893 aa8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 NEUROD6Q96NK8 337 aa8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 FANCD2OSQ96PS1 177 aa8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 APBA2Q99767 749 aa8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 DISC1Q9NRI5 854 aa8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 GINM1Q9NU53 330 aa8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 GJD2Q9UKL4 321 aa8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 PA2G4Q9UQ80 394 aaKnown RBP8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 ACTL7BQ9Y614 415 aa8.23□□□□□ -1.09
CEACAM1-208ENST00000403461 COL2A1P02458 1487 aaPredicted RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 DCDC2CA8MYV0 355 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 DHX15O43143 795 aaKnown RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 SRGAP3O43295 1099 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 CILPO75339 1184 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 HLA-DOAP06340 250 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 GNAI3P08754 354 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 CT47B1P0C2W7 299 aaPredicted RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 HOXA7P31268 230 aaPredicted RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 USP11P51784 963 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 TIMM10P62072 90 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 HERVK_113P62684 666 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 CCNA1P78396 465 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 RPL6Q02878 288 aaKnown RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 LRFN4Q6PJG9 635 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 ELMO3Q96BJ8 720 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 NSUN4Q96CB9 384 aaKnown RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 PLPPR2Q96GM1 343 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 TGIF2Q9GZN2 237 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 FAM105AQ9NUU6 356 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 MTMR10Q9NXD2 777 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 RANBP2P49792 3224 aaKnown RBP8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 ZNF521Q96K83 1311 aa8.22□□□□□ -1.09
CEACAM1-208ENST00000403461 SZT2Q5T011 3432 aa8.21□□□□□ -1.09
CEACAM1-208ENST00000403461 GFRA2O00451 464 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 MSCO60682 206 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 IGSF3O75054 1194 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 UQCRFS1P1P0C7P4 283 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 BMP3P12645 472 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 ERCC5P28715 1186 aaPredicted RBP8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 RING1Q06587 406 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 RAD51AP2Q09MP3 1159 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 TFCP2Q12800 502 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 WIPI1Q5MNZ9 446 aaPredicted RBP8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 WDR78Q5VTH9 848 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 MFSD14CQ5VZR4 134 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 GPR142Q7Z601 462 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 PLEKHH3Q7Z736 793 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 C12orf40Q86WS4 652 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 FOXP4Q8IVH2 680 aaPredicted RBP8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 FAM20CQ8IXL6 584 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 RNF214Q8ND24 703 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 FEZ1Q99689 392 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 PAGR1Q9BTK6 254 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 SPON2Q9BUD6 331 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 HMG20BQ9P0W2 317 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 ZSWIM8A7E2V4 1837 aa8.21□□□□□ -1.1
CEACAM1-208ENST00000403461 BPNT1O95861 308 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 COL6A1P12109 1028 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 CDK8P49336 464 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 CACNB2Q08289 660 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 FAM109BQ6ICB4 259 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 NAA16Q6N069 864 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 CYFIP1Q7L576 1253 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 CERS3Q8IU89 383 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 P2RX7Q99572 595 aaKnown RBP8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 YIPF2Q9BWQ6 316 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 NT5C1AQ9BXI3 368 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 SENP6Q9GZR1 1112 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 TXNRD2Q9NNW7 524 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 NOB1Q9ULX3 412 aaKnown RBP8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 TACC3Q9Y6A5 838 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 PFASO15067 1338 aa8.2□□□□□ -1.1
CEACAM1-208ENST00000403461 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 FANCGO15287 622 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 H2AFB1P0C5Y9 115 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 H2AFB2P0C5Z0 115 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 MAP4P27816 1152 aaKnown RBP8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 CCND3P30281 292 aaPredicted RBP8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 USP14P54578 494 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 SLFN5Q08AF3 891 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 G3BP1Q13283 466 aaKnown RBP eCLIP8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 OS9Q13438 667 aaPredicted RBP8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 MPP2Q14168 576 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 TTLL4Q14679 1199 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 LRRC26Q2I0M4 334 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 SGO2Q562F6 1265 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 PPM1JQ5JR12 505 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 CCDC158Q5M9N0 1113 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 CDPF1Q6NVV7 123 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 MAPKAPK5Q8IW41 473 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 SH3RF3Q8TEJ3 882 aaPredicted RBP8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 FBLIM1Q8WUP2 373 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 EZH1Q92800 747 aaPredicted RBP8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 MEIS3Q99687 375 aa8.19□□□□□ -1.1
CEACAM1-208ENST00000403461 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms