RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PADI3Q9ULW8 664 aa13.74□□□□□ -0.21
SPTLC1P3-201ENST00000403408 CACNA1BQ00975 2339 aa13.74□□□□□ -0.21
SPTLC1P3-201ENST00000403408 PROB1E7EW31 1015 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 FSCN2O14926 492 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 ATF7P17544 494 aaPredicted RBP13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 SP100P23497 879 aaPredicted RBP13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 NT5C2P49902 561 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 IGBP1P78318 339 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 TROAPQ12815 778 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 DUSP6Q16828 381 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 PCNX4Q63HM2 1172 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 PLEKHM2Q8IWE5 1019 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 FEZF2Q8TBJ5 459 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 DSCC1Q9BVC3 393 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 APOL5Q9BWW9 433 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 TLE6Q9H808 572 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 CDHR5Q9HBB8 845 aa13.73□□□□□ -0.21
SPTLC1P3-201ENST00000403408 GPR179Q6PRD1 2367 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 STAM2O75886 525 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 SCG2P13521 617 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 INSRRP14616 1297 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 APOBRQ0VD83 1088 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 TMEM266Q2M3C6 531 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 FAM102BQ5T8I3 360 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 TMEM105Q8N8V8 129 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 KRT23Q9C075 422 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 EVPLQ92817 2033 aa13.72□□□□□ -0.21
SPTLC1P3-201ENST00000403408 IGSF9BQ9UPX0 1349 aa13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 PRR23AA6NEV1 266 aa13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 HDAC1Q13547 482 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 COL9A3Q14050 684 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 IMMTQ16891 758 aaKnown RBP13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 TMEM40Q8WWA1 233 aa13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 SEPT1Q8WYJ6 367 aa13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 PKD2L1Q9P0L9 805 aa13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 TRPV2Q9Y5S1 764 aa13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 OTOGLQ3ZCN5 2332 aa13.71□□□□□ -0.21
SPTLC1P3-201ENST00000403408 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 GALR2O43603 387 aaPredicted RBP13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 FGF18O76093 207 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 BRD1O95696 1058 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ANKRD54Q6NXT1 300 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 TMEM184AQ6ZMB5 413 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 RSPH3Q86UC2 560 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PPP2R3CQ969Q6 453 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 CWH43Q9H720 699 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ERVK-5Q9HDB9 667 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ERAP1Q9NZ08 941 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PIK3CDO00329 1044 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 SARSP49591 514 aaKnown RBP13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ANTXR2P58335 489 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PLCB4Q15147 1175 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 COLGALT1Q8NBJ5 622 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 KREMEN2Q8NCW0 462 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 MICAL1Q8TDZ2 1067 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 GLG1Q92896 1179 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 GPRASP2Q96D09 838 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 CNNM2Q9H8M5 875 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 RNF19AQ9NV58 838 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 TYW1Q9NV66 732 aaKnown RBP13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 NOC2LQ9Y3T9 749 aaKnown RBP13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PCDHA2Q9Y5H9 948 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 SQORQ9Y6N5 450 aa13.69□□□□□ -0.22
SPTLC1P3-201ENST00000403408 TBKBP1A7MCY6 615 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 C2CD4DB7Z1M9 353 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 NBL1P41271 181 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 TECP42680 631 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PAK2Q13177 524 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 UBE2SQ16763 222 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PLPP4Q5VZY2 271 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 LLGL2Q6P1M3 1020 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 LRRC55Q6ZSA7 311 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 CYP2W1Q8TAV3 490 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 NEK1Q96PY6 1258 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 MYL10Q9BUA6 226 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 SMARCAD1Q9H4L7 1026 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 TRPC6Q9Y210 931 aa13.68□□□□□ -0.22
SPTLC1P3-201ENST00000403408 KDM3AQ9Y4C1 1321 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ACACBO00763 2458 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 C9IYK1 514 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 CYP21A2P08686 494 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 STAG3L1P0CL83 205 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 FGFR1P11362 822 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PBX3P40426 434 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PTH1RQ03431 593 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 UBE3AQ05086 875 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 IER5Q5VY09 327 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms