RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 TERF2Q15554 542 aa10.31□□□□□ -0.76
CSMD1-202ENST00000400186 GCFC2P16383 781 aaKnown RBP10.31□□□□□ -0.76
CSMD1-202ENST00000400186 ICA1LQ8NDH6 482 aa10.31□□□□□ -0.76
CSMD1-202ENST00000400186 PARVGQ9HBI0 331 aa10.31□□□□□ -0.76
CSMD1-202ENST00000400186 PZPP20742 1482 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 PPP1R12AO14974 1030 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 TJP3O95049 919 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 GGCXP38435 758 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 DYNC1I2Q13409 638 aaKnown RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 LRRC41Q15345 812 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 GADL1Q6ZQY3 521 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 SAYSD1Q9NPB0 183 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 NDE1Q9NXR1 346 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 STK32BQ9NY57 414 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 ADAM21Q9UKJ8 722 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 HOXA7P31268 230 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 ADCK5Q3MIX3 580 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 GPATCH4Q5T3I0 446 aaKnown RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 EIF4A1P60842 406 aaKnown RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 THOC1Q96FV9 657 aaKnown RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 IRAK4Q9NWZ3 460 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 CLIC2O15247 247 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 ADAMTS12P58397 1594 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 COPEO14579 308 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 CHUKO15111 745 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 FOXD4Q12950 439 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 ARL13BQ3SXY8 428 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 DNAJC17Q9NVM6 304 aaKnown RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 STOML1Q9UBI4 398 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 TRPC5Q9UL62 973 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 ZBTB38Q8NAP3 1195 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 NACC1Q96RE7 527 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 TMEM206Q9H813 350 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 ZWILCHQ9H900 591 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 MRPL40Q9NQ50 206 aaKnown RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 SAMSN1Q9NSI8 373 aaKnown RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 E9PMD0 336 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 PYGBP11216 843 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 MYH11P35749 1972 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 FRA10AC1Q70Z53 315 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 VPS39Q96JC1 886 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 FTOQ9C0B1 505 aaKnown RBP eCLIP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 MMP1P03956 469 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 PAMP19021 973 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 MIS18BP1Q6P0N0 1132 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 KCNV2Q8TDN2 545 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 TTC17Q96AE7 1141 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 BTBD6Q96KE9 485 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 KLC2Q9H0B6 622 aa10.3□□□□□ -0.76
CSMD1-202ENST00000400186 MAP1BP46821 2468 aaKnown RBP10.3□□□□□ -0.76
CSMD1-202ENST00000400186 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 PALMO75781 387 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 RASGRP4Q8TDF6 673 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 PAWRQ96IZ0 340 aaKnown RBP10.29□□□□□ -0.76
CSMD1-202ENST00000400186 OLFM3Q96PB7 478 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 INO80B-WBP1J3KQ70 363 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 RWDD2BP57060 319 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 PSMD2Q13200 908 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 HSPH1Q92598 858 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 INO80BQ9C086 356 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-202ENST00000400186 SLC24A3Q9HC58 644 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 MAGOHP61326 146 aaKnown RBP10.29□□□□□ -0.76
CSMD1-202ENST00000400186 CAPRIN1Q14444 709 aaKnown RBP10.29□□□□□ -0.76
CSMD1-202ENST00000400186 PPP4R3CPQ6ZMV5 832 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 RGS9BPQ6ZS82 235 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 METTL23Q86XA0 190 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 GINM1Q9NU53 330 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 CROCC2H7BZ55 1655 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 DIAPH2O60879 1101 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 SZRD1Q7Z422 152 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 HLA-DPA1P20036 260 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 TTLL11Q8NHH1 800 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 TGS1Q96RS0 853 aaKnown RBP10.29□□□□□ -0.76
CSMD1-202ENST00000400186 STAT2P52630 851 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 ZMYM1Q5SVZ6 1142 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 TTLL7Q6ZT98 887 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 MAP4K1Q92918 833 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 PTPRTO14522 1441 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 YEATS2Q9ULM3 1422 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 F8W8V4 182 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 ZNF18P17022 549 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 SOX5P35711 763 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 GYS2P54840 703 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 DNAJC10Q8IXB1 793 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 DDX17Q92841 729 aaKnown RBP10.29□□□□□ -0.76
CSMD1-202ENST00000400186 FAF2Q96CS3 445 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 PAGE5Q96GU1 130 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 STX18Q9P2W9 335 aaKnown RBP10.29□□□□□ -0.76
CSMD1-202ENST00000400186 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
CSMD1-202ENST00000400186 STRIP2Q9ULQ0 834 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 ERVV-2B6SEH9 535 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 CD58P19256 250 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 PDXDC1Q6P996 788 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 HACD3Q9P035 362 aa10.29□□□□□ -0.76
CSMD1-202ENST00000400186 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
CSMD1-202ENST00000400186 KRT4P19013 534 aa10.28□□□□□ -0.76
CSMD1-202ENST00000400186 CCND2P30279 289 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms