RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MYBP10242 640 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 GOLGA8FQ08AF8 430 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 GOLGA8DPQ0D2H9 430 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 SREBF2Q12772 1141 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 NOGQ13253 232 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 EPHA7Q15375 998 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 SPATA20Q8TB22 786 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 GPRASP2Q96D09 838 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 ZNF830Q96NB3 372 aaPredicted RBP13.01□□□□□ -0.33
SKA3-203ENST00000400018 RIT2Q99578 217 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 GJD2Q9UKL4 321 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 RASSF10A6NK89 507 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 PRPF6O94906 941 aaKnown RBP13.01□□□□□ -0.33
SKA3-203ENST00000400018 PRKCEQ02156 737 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 COASYQ13057 564 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 GIT2Q14161 759 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 OLFML2BQ68BL8 750 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 DHX37Q8IY37 1157 aaKnown RBP13.01□□□□□ -0.33
SKA3-203ENST00000400018 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 GLG1Q92896 1179 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 NAP1L4Q99733 375 aaKnown RBP13.01□□□□□ -0.33
SKA3-203ENST00000400018 PANK4Q9NVE7 773 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 MAP3K20Q9NYL2 800 aaKnown RBP13.01□□□□□ -0.33
SKA3-203ENST00000400018 PCDHA10Q9Y5I2 948 aa13.01□□□□□ -0.33
SKA3-203ENST00000400018 UNCXA6NJT0 531 aa13□□□□□ -0.33
SKA3-203ENST00000400018 WDR64B1ANS9 1081 aa13□□□□□ -0.33
SKA3-203ENST00000400018 DYNC1LI2O43237 492 aaPredicted RBP13□□□□□ -0.33
SKA3-203ENST00000400018 LETM1O95202 739 aaPredicted RBP13□□□□□ -0.33
SKA3-203ENST00000400018 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
SKA3-203ENST00000400018 LACTBP83111 547 aaPredicted RBP13□□□□□ -0.33
SKA3-203ENST00000400018 MCTP2Q6DN12 878 aa13□□□□□ -0.33
SKA3-203ENST00000400018 ABHD15Q6UXT9 468 aa13□□□□□ -0.33
SKA3-203ENST00000400018 TRPV1Q8NER1 839 aa13□□□□□ -0.33
SKA3-203ENST00000400018 TRIB2Q92519 343 aa13□□□□□ -0.33
SKA3-203ENST00000400018 TMEM143Q96AN5 459 aa13□□□□□ -0.33
SKA3-203ENST00000400018 FAM84AQ96KN4 292 aa13□□□□□ -0.33
SKA3-203ENST00000400018 IWS1Q96ST2 819 aa13□□□□□ -0.33
SKA3-203ENST00000400018 KATNBL1Q9H079 304 aa13□□□□□ -0.33
SKA3-203ENST00000400018 RNPEPQ9H4A4 650 aa13□□□□□ -0.33
SKA3-203ENST00000400018 TBC1D22BQ9NU19 505 aa13□□□□□ -0.33
SKA3-203ENST00000400018 EXOC1Q9NV70 894 aa13□□□□□ -0.33
SKA3-203ENST00000400018 SLC45A1Q9Y2W3 748 aa13□□□□□ -0.33
SKA3-203ENST00000400018 MYADML2A6NDP7 307 aa13□□□□□ -0.33
SKA3-203ENST00000400018 P4HBP07237 508 aaKnown RBP13□□□□□ -0.33
SKA3-203ENST00000400018 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
SKA3-203ENST00000400018 MORN1Q5T089 497 aa13□□□□□ -0.33
SKA3-203ENST00000400018 CCDC62Q6P9F0 684 aa13□□□□□ -0.33
SKA3-203ENST00000400018 DAW1Q8N136 415 aa13□□□□□ -0.33
SKA3-203ENST00000400018 LRRC71Q8N4P6 559 aa13□□□□□ -0.33
SKA3-203ENST00000400018 NOC3LQ8WTT2 800 aaKnown RBP13□□□□□ -0.33
SKA3-203ENST00000400018 NRBP1Q9UHY1 535 aa13□□□□□ -0.33
SKA3-203ENST00000400018 NFE2L3Q9Y4A8 694 aa13□□□□□ -0.33
SKA3-203ENST00000400018 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
SKA3-203ENST00000400018 MAPK4P31152 587 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 RARRES1P49788 294 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 PADI6Q6TGC4 694 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 ZSWIM2Q8NEG5 633 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 SHCBP1Q8NEM2 672 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 CEP170P1Q96L14 293 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
SKA3-203ENST00000400018 SMC2O95347 1197 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 ADCY5O95622 1261 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 PGK1P00558 417 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 FAM102BQ5T8I3 360 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 NT5DC1Q5TFE4 455 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 MYCT1Q8N699 235 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 SYT2Q8N9I0 419 aaPredicted RBP12.99□□□□□ -0.33
SKA3-203ENST00000400018 NELFBQ8WX92 580 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 C7orf25Q9BPX7 421 aa12.99□□□□□ -0.33
SKA3-203ENST00000400018 POLR3CQ9BUI4 534 aaPredicted RBP12.99□□□□□ -0.33
SKA3-203ENST00000400018 ARHGEF35A5YM69 484 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 HIP1RO75146 1068 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 STBD1O95210 358 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 ARID5BQ14865 1188 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 HYIQ5T013 277 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 C1orf186Q6ZWK4 172 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 BSNDQ8WZ55 320 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 GPR20Q99678 358 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 ZSWIM4Q9H7M6 989 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 CLIC2O15247 247 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 EYA4O95677 639 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 SUPT20HL2P0C7V6 817 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 ARHGAP1Q07960 439 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 CELF3Q5SZQ8 465 aaKnown RBP12.98□□□□□ -0.33
SKA3-203ENST00000400018 ANKRD40Q6AI12 368 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 KANK3Q6NY19 840 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
SKA3-203ENST00000400018 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 ZNF302Q9NR11 478 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 HOOK1Q9UJC3 728 aaKnown RBP12.98□□□□□ -0.33
SKA3-203ENST00000400018 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
SKA3-203ENST00000400018 FAM170AA1A519 330 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 STRNO43815 780 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 CCND3P30281 292 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms