RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 TTLL11Q8NHH1 800 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 PHACTR3Q96KR7 559 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 COL4A3BPQ9Y5P4 624 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 CFAP65Q6ZU64 1925 aaKnown RBP8.96□□□□□ -0.98
CHD8-201ENST00000399982 KPNA7A9QM74 516 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 DNAJC6O75061 913 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 FAM107AO95990 144 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 NDUFA8P51970 172 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 LRRC63Q05C16 580 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 DNAAF3Q8N9W5 541 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 DDHD1Q8NEL9 900 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 TRPV6Q9H1D0 765 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 HPS4Q9NQG7 708 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 DENND2AQ9ULE3 1009 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 EMILIN1Q9Y6C2 1016 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 TNNC2P02585 160 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 PAMP19021 973 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 TXKP42681 527 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 SYDE1Q6ZW31 735 aaPredicted RBP8.96□□□□□ -0.98
CHD8-201ENST00000399982 ACAD11Q709F0 780 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 RFX6Q8HWS3 928 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 WWP1Q9H0M0 922 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 NLRC4Q9NPP4 1024 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 C1orf112Q9NSG2 853 aa8.96□□□□□ -0.98
CHD8-201ENST00000399982 UBN2Q6ZU65 1347 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 PRPF4O43172 522 aaKnown RBP eCLIP8.95□□□□□ -0.98
CHD8-201ENST00000399982 FKBP3Q00688 224 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 DHX34Q14147 1143 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 CPXCR1Q8N123 301 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 SLC38A10Q9HBR0 1119 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 ZNF212Q9UDV6 495 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 LZTS3O60299 673 aaPredicted RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 CHEK2O96017 543 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 GRK2P25098 689 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 S100A5P33763 92 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 VHLP40337 213 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 TMED2Q15363 201 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 SLC26A7Q8TE54 656 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 DEPDC1BQ8WUY9 529 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.95□□□□□ -0.985e-7■■■□□ 15.8
CHD8-201ENST00000399982 DNAJC17Q9NVM6 304 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 CHPF2Q9P2E5 772 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 NRBP1Q9UHY1 535 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 LZTS1Q9Y250 596 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 F8W8V4 182 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 GAP43P17677 238 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 RASSF7Q02833 373 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 BEND6Q5SZJ8 279 aaPredicted RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 DYMQ7RTS9 669 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 CROCCP3Q8IVE0 287 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 REXO1Q8N1G1 1221 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 DTX3LQ8TDB6 740 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 DDX17Q92841 729 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 CNOT6LQ96LI5 555 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 ETAA1Q9NY74 926 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 MAP10Q9P2G4 905 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 TSR3Q9UJK0 312 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 FBXL5Q9UKA1 691 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 RIMS2Q9UQ26 1411 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 ZNF839A8K0R7 811 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 TEX28O15482 410 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 HSPD1P10809 573 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 PTPREP23469 700 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 GLG1Q92896 1179 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 NLRP4Q96MN2 994 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 MXD3Q9BW11 206 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 MRPS26Q9BYN8 205 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 NHEJ1Q9H9Q4 299 aaPredicted RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 LRFN2Q9ULH4 789 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 KIAA0586Q9BVV6 1533 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 KLHL18O94889 574 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 PAPOLAP51003 745 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 MFAP3P55082 362 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 RAB14P61106 215 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 TSPY1Q01534 308 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 ACTN3Q08043 901 aaPredicted RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 TNNI3KQ59H18 835 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 SPOPLQ6IQ16 392 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 TRAF7Q6Q0C0 670 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 LMBR1LQ6UX01 489 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 RSRC2Q7L4I2 434 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 RRM2BQ7LG56 351 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 ATP8A2Q9NTI2 1148 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 FPGT-TNNI3KV9GXZ4 949 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 PRG4Q92954 1404 aaPredicted RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 FLT4P35916 1363 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 GOLGA8TH3BQL2 631 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 BUB1O43683 1085 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 PRDM1O75626 825 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 GOLGA8HP0CJ92 632 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 EPM2AIP1Q7L775 607 aaPredicted RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 FGD2Q7Z6J4 655 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 RASSF3Q86WH2 238 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 TTC13Q8NBP0 860 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 SMAD5Q99717 465 aaKnown RBP8.95□□□□□ -0.98
CHD8-201ENST00000399982 CNPY3Q9BT09 278 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 SLC12A6Q9UHW9 1150 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 PCDHA13Q9Y5I0 950 aa8.95□□□□□ -0.98
CHD8-201ENST00000399982 TBKBP1A7MCY6 615 aa8.94□□□□□ -0.98
CHD8-201ENST00000399982 CPP00450 1065 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms