RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ANGPT1Q15389 498 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 HOXB7P09629 217 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 LIG3P49916 1009 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 PAN2Q504Q3 1202 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 NANOGNBQ7Z5D8 188 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 TDRD7Q8NHU6 1098 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 CNOT7Q9UIV1 285 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 PALLDQ8WX93 1383 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 ADCY10Q96PN6 1610 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 USP17L10C9JJH3 530 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 IKBKBO14920 756 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 CA4P22748 312 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 GPSM2P81274 684 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 PHKG1Q16816 387 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 PIK3R5Q8WYR1 880 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 SP110Q9HB58 689 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 SAMSN1Q9NSI8 373 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 CCDC159P0C7I6 412 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 TNFAIP2Q03169 654 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 FLOT2Q14254 428 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 RPS6KA1Q15418 735 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 FAM76AQ8TAV0 307 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 HSPH1Q92598 858 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 SECISBP2LQ93073 1101 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 WDR11Q9BZH6 1224 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 NDFIP2Q9NV92 336 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 PRPSAP2O60256 369 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 KPNA1P52294 538 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 CCDC38Q502W7 563 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 SPATA2LQ8IUW3 424 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 HOMEZQ8IX15 550 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 VMP1Q96GC9 406 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 SEPT5Q99719 369 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 PTCH1Q13635 1447 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 ARHGAP31Q2M1Z3 1444 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 OOSP2Q86WS3 158 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 KATNAL1Q9BW62 490 aa11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-216ENST00000399638 H3BRJ5 948 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 CPP00450 1065 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 DDIT3P35638 169 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 EVCP57679 992 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 SURF1Q15526 300 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 DARS2Q6PI48 645 aaKnown RBP11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 TRIM59Q8IWR1 403 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 FAM227BQ96M60 508 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 SELENONQ9NZV5 590 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 DYNC1LI2O43237 492 aaPredicted RBP11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 TXNRD1Q16881 649 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 ENGASEQ8NFI3 743 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 DCUN1D1Q96GG9 259 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 ERVK-7P63135 1459 aa11.77□□□□□ -0.52
CACNA1C-216ENST00000399638 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 E5RI56 91 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 K7ERI5 159 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 SNX2O60749 519 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 HSPD1P10809 573 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 NR1H3Q13133 447 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 LVRNQ6Q4G3 990 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 TAS2R42Q7RTR8 314 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 B4GALNT2Q8NHY0 566 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 BAIAP2L1Q9UHR4 511 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 ORC6Q9Y5N6 252 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 ARAP3Q8WWN8 1544 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 ASB14A6NK59 587 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 SGSM2O43147 1006 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 ADCY9O60503 1353 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 CUTAO60888 179 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 ZNF568Q3ZCX4 644 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 SYTL3Q4VX76 610 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 CCDC92Q53HC0 331 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 RSBN1LQ6PCB5 846 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 POTEDQ86YR6 584 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 NDE1Q9NXR1 346 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 ARMCX3Q9UH62 379 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 TTC4O95801 387 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 KRT14P02533 472 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 EEF1DP29692 281 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 IMPG1Q17R60 797 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 FSD1LQ9BXM9 530 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 CALN1Q9BXU9 219 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 MSRAQ9UJ68 235 aa11.77□□□□□ -0.53
CACNA1C-216ENST00000399638 HMBSP08397 361 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 MAGEA1P43355 309 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 KBTBD3Q8NAB2 608 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 RAPGEF5Q92565 580 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 TRIM4Q9C037 500 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 SPTLC1O15269 473 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 RPSAP08865 295 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 CUL1Q13616 776 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 NUDT12Q9BQG2 462 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 DONSONQ9NYP3 566 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms