RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 FAM169AQ9Y6X4 670 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 G3V3G9 751 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 PPEF1O14829 653 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-205ENST00000398978 UBXN2AP68543 259 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 PAK2Q13177 524 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 HYIQ5T013 277 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 DCAF8Q5TAQ9 597 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 APOBEC3HQ6NTF7 200 aaKnown RBP21.39■■□□□ 1.01
COL13A1-205ENST00000398978 ALKBH5Q6P6C2 394 aaKnown RBP21.39■■□□□ 1.01
COL13A1-205ENST00000398978 LUC7LQ9NQ29 371 aaKnown RBP21.39■■□□□ 1.01
COL13A1-205ENST00000398978 NHSQ6T4R5 1651 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 EBAG9O00559 213 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 GCFC2P16383 781 aaKnown RBP21.38■■□□□ 1.01
COL13A1-205ENST00000398978 ALS2CLQ60I27 953 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 PPP1R18Q6NYC8 613 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 IQCKQ8N0W5 287 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 CERKQ8TCT0 537 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 SYN2Q92777 582 aaPredicted RBP21.38■■□□□ 1.01
COL13A1-205ENST00000398978 GNA14O95837 355 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 SEC24CP53992 1094 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 SLC20A2Q08357 652 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 KNOP1Q1ED39 458 aaKnown RBP21.38■■□□□ 1.01
COL13A1-205ENST00000398978 CEP85LQ5SZL2 805 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 DPY19L2P1Q6NXN4 242 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 NUCKS1Q9H1E3 243 aaKnown RBP21.38■■□□□ 1.01
COL13A1-205ENST00000398978 NEUROG2Q9H2A3 272 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 TSKSQ9UJT2 592 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 DNM3Q9UQ16 869 aa21.38■■□□□ 1.01
COL13A1-205ENST00000398978 GFPT2O94808 682 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 AFPP02771 609 aaKnown RBP21.37■■□□□ 1.01
COL13A1-205ENST00000398978 XRCC5P13010 732 aaKnown RBP21.37■■□□□ 1.01
COL13A1-205ENST00000398978 SPIRE1Q08AE8 756 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 CTTNQ14247 550 aaKnown RBP21.37■■□□□ 1.01
COL13A1-205ENST00000398978 TTC31Q49AM3 519 aaPredicted RBP21.37■■□□□ 1.01
COL13A1-205ENST00000398978 ZC2HC1CQ53FD0 456 aaPredicted RBP21.37■■□□□ 1.01
COL13A1-205ENST00000398978 NAGPAQ9UK23 515 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 PLAAQ9Y263 795 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 NDUFAB1O14561 156 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 KIF4AO95239 1232 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 FLT3P36888 993 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 COG2Q14746 738 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 U2AF1L4Q8WU68 220 aaKnown RBP21.37■■□□□ 1.01
COL13A1-205ENST00000398978 EML1O00423 815 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 ETNPPLQ8TBG4 499 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 TRIM31Q9BZY9 425 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 GCNT4Q9P109 453 aa21.37■■□□□ 1.01
COL13A1-205ENST00000398978 NMT1P30419 496 aaKnown RBP21.36■■□□□ 1.01
COL13A1-205ENST00000398978 COPB2P35606 906 aa21.36■■□□□ 1.01
COL13A1-205ENST00000398978 METTL13Q8N6R0 699 aa21.36■■□□□ 1.01
COL13A1-205ENST00000398978 CELF4Q9BZC1 486 aaKnown RBP21.36■■□□□ 1.01
COL13A1-205ENST00000398978 SHTN1A0MZ66 631 aa21.36■■□□□ 1.01
COL13A1-205ENST00000398978 GLE1Q53GS7 698 aaKnown RBP21.36■■□□□ 1.01
COL13A1-205ENST00000398978 BCCIPQ9P287 314 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL13A1-205ENST00000398978 BACH1O14867 736 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 NR3C1P04150 777 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 ABCB4P21439 1286 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 MARSP56192 900 aaKnown RBP21.35■■□□□ 1.01
COL13A1-205ENST00000398978 CERKLQ49MI3 558 aaPredicted RBP21.35■■□□□ 1.01
COL13A1-205ENST00000398978 OSGEPQ9NPF4 335 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL13A1-205ENST00000398978 SWAP70Q9UH65 585 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 AMACRQ9UHK6 382 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 PLS1Q14651 629 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 SIAH1Q8IUQ4 282 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 LENG9Q96B70 501 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 ASTN1O14525 1302 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 LRRC4CQ9HCJ2 640 aa21.35■■□□□ 1.01
COL13A1-205ENST00000398978 FRMD3A2A2Y4 597 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 MSH4O15457 936 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 ZNF76P36508 570 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 JAG1P78504 1218 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 RDH13Q8NBN7 331 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 TEKT1Q969V4 418 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 NOC2LQ9Y3T9 749 aaKnown RBP21.34■■□□□ 1.01
COL13A1-205ENST00000398978 TNFRSF8P28908 595 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 TNNC1P63316 161 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 EDRF1Q3B7T1 1238 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 TADA2BQ86TJ2 420 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 DPH5Q9H2P9 285 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 ZNF831Q5JPB2 1677 aa21.34■■□□□ 1.01
COL13A1-205ENST00000398978 SPDYE3A6NKU9 549 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 SART1O43290 800 aaKnown RBP21.33■■□□□ 1.01
COL13A1-205ENST00000398978 EPB41P11171 864 aaKnown RBP21.33■■□□□ 1.01
COL13A1-205ENST00000398978 NR1D1P20393 614 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 CRKP46108 304 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 USP11P51784 963 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 EPHA7Q15375 998 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 PEX26Q7Z412 305 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 DAAM2Q86T65 1068 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 TPH2Q8IWU9 490 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 SYT2Q8N9I0 419 aaPredicted RBP21.33■■□□□ 1.01
COL13A1-205ENST00000398978 COA1Q9GZY4 146 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 SIX2Q9NPC8 291 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 SEPT11Q9NVA2 429 aaKnown RBP21.33■■□□□ 1.01
COL13A1-205ENST00000398978 NR2E1Q9Y466 385 aa21.33■■□□□ 1.01
COL13A1-205ENST00000398978 F5H6K3 240 aa21.33■■□□□ 1
COL13A1-205ENST00000398978 DDX3XO00571 662 aaKnown RBP eCLIP21.33■■□□□ 1
COL13A1-205ENST00000398978 ICA1Q05084 483 aa21.33■■□□□ 1
COL13A1-205ENST00000398978 KLRC3Q07444 240 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms