RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 PLEKHG3A1L390 1219 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 ZBTB24O43167 697 aaPredicted RBP12.67□□□□□ -0.38
TMF1-201ENST00000398559 GDF11O95390 407 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 PDHA1P08559 390 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 CCND2P30279 289 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 YWHAHQ04917 246 aaPredicted RBP12.67□□□□□ -0.38
TMF1-201ENST00000398559 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 KIF9Q9HAQ2 790 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 ZFP69BQ9UJL9 534 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 CAPN11Q9UMQ6 739 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 ADGRL2O95490 1459 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 KRT10P13645 584 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 FAM47EQ6ZV65 393 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 EXT2Q93063 718 aa12.67□□□□□ -0.38
TMF1-201ENST00000398559 HEXIM2Q96MH2 286 aaKnown RBP12.67□□□□□ -0.38
TMF1-201ENST00000398559 CDO1Q16878 200 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 EPM2AIP1Q7L775 607 aaPredicted RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 METTL23Q86XA0 190 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 RHOT2Q8IXI1 618 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 YY1AP1Q9H869 796 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 RASA4BC9J798 803 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 COPEO14579 308 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 RASA4O43374 803 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 KITP10721 976 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 MTERF2Q49AM1 385 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 OLA1Q9NTK5 396 aaKnown RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 ABCF3Q9NUQ8 709 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 XDHP47989 1333 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 TJP3O95049 919 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 CTTNQ14247 550 aaKnown RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 KLC3Q6P597 504 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 CDC26Q8NHZ8 85 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 USP17L8P0C7I0 530 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 XPAP23025 273 aaPredicted RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 NECTIN1Q15223 517 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 SUCLA2Q9P2R7 463 aaPredicted RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 TYW5A2RUC4 315 aaKnown RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 PSMA2P25787 234 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
TMF1-201ENST00000398559 SYDE2Q5VT97 1194 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 GOLPH3LQ9H4A5 285 aa12.66□□□□□ -0.38
TMF1-201ENST00000398559 TRIM49BA6NDI0 452 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 SOX5P35711 763 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
TMF1-201ENST00000398559 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 LRRC4Q9HBW1 653 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 SEC31BQ9NQW1 1179 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 SFI1A8K8P3 1242 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 MCF2P10911 925 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 ZNF18P17022 549 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 RGS9BPQ6ZS82 235 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 SRRM1Q8IYB3 904 aaKnown RBP12.65□□□□□ -0.38
TMF1-201ENST00000398559 SLC24A3Q9HC58 644 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 ZNF233A6NK53 670 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 CHUKO15111 745 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 RFX1P22670 979 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 STAT2P52630 851 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 DEUP1Q05D60 604 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 USP17L3A6NCW0 530 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 USP17L4A6NCW7 530 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 PLEKHA8P1O95397 391 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 HOXA7P31268 230 aaPredicted RBP12.65□□□□□ -0.38
TMF1-201ENST00000398559 ICE2Q659A1 982 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 TTC1Q99614 292 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 SLC12A6Q9UHW9 1150 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 SYNMO15061 1565 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 ATP5HO75947 161 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 ARL6IP4Q66PJ3 421 aaKnown RBP12.65□□□□□ -0.38
TMF1-201ENST00000398559 CEP72Q9P209 647 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 SYNGAP1Q96PV0 1343 aa12.65□□□□□ -0.38
TMF1-201ENST00000398559 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.39
TMF1-201ENST00000398559 BMP3P12645 472 aa12.65□□□□□ -0.39
TMF1-201ENST00000398559 ABCD1P33897 745 aa12.65□□□□□ -0.39
TMF1-201ENST00000398559 HABP4Q5JVS0 413 aaKnown RBP12.65□□□□□ -0.39
TMF1-201ENST00000398559 ARHGEF25Q86VW2 580 aa12.65□□□□□ -0.39
TMF1-201ENST00000398559 ERICH1Q86X53 443 aa12.65□□□□□ -0.39
TMF1-201ENST00000398559 GIPC2Q8TF65 315 aa12.65□□□□□ -0.39
TMF1-201ENST00000398559 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.39
TMF1-201ENST00000398559 LEMD3Q9Y2U8 911 aa12.65□□□□□ -0.39
TMF1-201ENST00000398559 GMNCA6NCL1 334 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 CHEK2O96017 543 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 CASP1P29466 404 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 PMS2P54278 862 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 WDR75Q8IWA0 830 aaKnown RBP12.64□□□□□ -0.39
TMF1-201ENST00000398559 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.64□□□□□ -0.39
TMF1-201ENST00000398559 PPP1R16BQ96T49 567 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms