RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 BRAPQ7Z569 592 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 SERINC5Q86VE9 423 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 SCLYQ96I15 445 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 GDF15Q99988 308 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 SH2D3AQ9BRG2 576 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 OSBPL7Q9BZF2 842 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 HIPK3Q9H422 1215 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 ZDHHC9Q9Y397 364 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 CLIC4Q9Y696 253 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 NRCAMQ92823 1304 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 SLITRK3O94933 977 aa17.73■□□□□ 0.43
MBD1-207ENST00000398488 PRKCEQ02156 737 aa17.73■□□□□ 0.43
MBD1-207ENST00000398488 CYP4A11Q02928 519 aa17.73■□□□□ 0.43
MBD1-207ENST00000398488 GPNMBQ14956 572 aa17.73■□□□□ 0.43
MBD1-207ENST00000398488 CKAP2LQ8IYA6 745 aa17.73■□□□□ 0.43
MBD1-207ENST00000398488 EIF2AK1Q9BQI3 630 aaKnown RBP17.73■□□□□ 0.43
MBD1-207ENST00000398488 PRO3102Q9H379 93 aa17.73■□□□□ 0.43
MBD1-207ENST00000398488 PRKAG2Q9UGJ0 569 aa17.73■□□□□ 0.43
MBD1-207ENST00000398488 NOD1Q9Y239 953 aa17.73■□□□□ 0.43
MBD1-207ENST00000398488 MYH9P35579 1960 aaKnown RBP17.73■□□□□ 0.43
MBD1-207ENST00000398488 MBLAC1A4D2B0 266 aaPredicted RBP17.72■□□□□ 0.43
MBD1-207ENST00000398488 OATP04181 439 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 SLC26A2P50443 739 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 ATP2C1P98194 919 aaPredicted RBP17.72■□□□□ 0.43
MBD1-207ENST00000398488 PTK7Q13308 1070 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 ZNF579Q8NAF0 562 aaKnown RBP17.72■□□□□ 0.43
MBD1-207ENST00000398488 CEP89Q96ST8 783 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 HSD17B14Q9BPX1 270 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
MBD1-207ENST00000398488 PP2D1A8MPX8 630 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 HBP1O60381 514 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 SPATA31C1P0DKV0 1188 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 CSF2RAP15509 400 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 PSMC5P62195 406 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 SF3A1Q15459 793 aaKnown RBP17.72■□□□□ 0.43
MBD1-207ENST00000398488 PRPF38BQ5VTL8 546 aaKnown RBP17.72■□□□□ 0.43
MBD1-207ENST00000398488 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 ANO5Q75V66 913 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 C16orf59Q7L2K0 433 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 BBXQ8WY36 941 aaPredicted RBP17.72■□□□□ 0.43
MBD1-207ENST00000398488 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
MBD1-207ENST00000398488 SCN5AQ14524 2016 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 KAT6AQ92794 2004 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 MED24O75448 989 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 P4HBP07237 508 aaKnown RBP17.71■□□□□ 0.43
MBD1-207ENST00000398488 ZSCAN22P10073 491 aaPredicted RBP17.71■□□□□ 0.43
MBD1-207ENST00000398488 CKBP12277 381 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 KLRC1P26715 233 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 CDC25AP30304 524 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 QARSP47897 775 aaKnown RBP17.71■□□□□ 0.43
MBD1-207ENST00000398488 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
MBD1-207ENST00000398488 GRIN1Q05586 938 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 MBTPS1Q14703 1052 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 PTPAQ15257 358 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 TARBP2Q15633 366 aaKnown RBP17.71■□□□□ 0.43
MBD1-207ENST00000398488 ECM1Q16610 540 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 ZNF618Q5T7W0 954 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 PLA2G4FQ68DD2 849 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 MFSD5Q6N075 450 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 MTHFD1LQ6UB35 978 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 USP28Q96RU2 1077 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 LXNQ9BS40 222 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 TUBE1Q9UJT0 475 aa17.71■□□□□ 0.43
MBD1-207ENST00000398488 RRN3P2A6NIE6 340 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 DDX11L8A8MPP1 907 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 C22orf31O95567 290 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 IQCF3P0C7M6 154 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 NPEPPSP55786 919 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 CEBPZQ03701 1054 aaKnown RBP17.7■□□□□ 0.42
MBD1-207ENST00000398488 RBL2Q08999 1139 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 BECN1Q14457 450 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
MBD1-207ENST00000398488 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
MBD1-207ENST00000398488 TPH2Q8IWU9 490 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 DNAJB3Q8WWF6 145 aa17.7■□□□□ 0.42
MBD1-207ENST00000398488 COLQQ9Y215 455 aaPredicted RBP17.7■□□□□ 0.42
MBD1-207ENST00000398488 F13A1P00488 732 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 ACRP10323 421 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 GNAT1P11488 350 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 THPOP40225 353 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 TCTN1Q2MV58 587 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 XKR3Q5GH77 459 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 ZNF484Q5JVG2 852 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 CATSPER3Q86XQ3 398 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 IGSF22Q8N9C0 903 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 MMTAG2Q9BU76 263 aaKnown RBP17.69■□□□□ 0.42
MBD1-207ENST00000398488 NIFKQ9BYG3 293 aaKnown RBP17.69■□□□□ 0.42
MBD1-207ENST00000398488 ZSCAN16Q9H4T2 348 aaPredicted RBP17.69■□□□□ 0.42
MBD1-207ENST00000398488 NRBP2Q9NSY0 501 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 SEPT9Q9UHD8 586 aaPredicted RBP17.69■□□□□ 0.42
MBD1-207ENST00000398488 PCDHA2Q9Y5H9 948 aa17.69■□□□□ 0.42
MBD1-207ENST00000398488 PITPNM1O00562 1244 aa17.68■□□□□ 0.42
MBD1-207ENST00000398488 BRD1O95696 1058 aa17.68■□□□□ 0.42
MBD1-207ENST00000398488 CTSHP09668 335 aa17.68■□□□□ 0.42
MBD1-207ENST00000398488 PRPHP41219 470 aa17.68■□□□□ 0.42
MBD1-207ENST00000398488 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
MBD1-207ENST00000398488 MTERF2Q49AM1 385 aa17.68■□□□□ 0.42
MBD1-207ENST00000398488 C9orf50Q5SZB4 431 aa17.68■□□□□ 0.42
MBD1-207ENST00000398488 C4orf19Q8IY42 314 aa17.68■□□□□ 0.42
MBD1-207ENST00000398488 FAM167AQ96KS9 214 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms