RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 B3GNT9Q6UX72 402 aa28.52■■■□□ 2.16
TSPAN4-207ENST00000397411 TRAPPC12Q8WVT3 735 aa28.52■■■□□ 2.16
TSPAN4-207ENST00000397411 FTOQ9C0B1 505 aaKnown RBP eCLIP28.52■■■□□ 2.16
TSPAN4-207ENST00000397411 EML1O00423 815 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 DKC1O60832 514 aaKnown RBP eCLIP28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 ATP4AP20648 1035 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 EPHB4P54760 987 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 ADAM17P78536 824 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 EPHA7Q15375 998 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 SHHQ15465 462 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 BANK1Q8NDB2 785 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 WNT8BQ93098 351 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 TMEM60Q9H2L4 133 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 CEP131Q9UPN4 1083 aa28.51■■■□□ 2.15
TSPAN4-207ENST00000397411 COL1A2P08123 1366 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 IGSF9BQ9UPX0 1349 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 PARNO95453 639 aaKnown RBP28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 FGBP02675 491 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 OATP04181 439 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 PSMC5P62195 406 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 NBR1Q14596 966 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 TRIM71Q2Q1W2 868 aaKnown RBP28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 RILPL1Q5EBL4 403 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 ZNF618Q5T7W0 954 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 PSRC1Q6PGN9 363 aaPredicted RBP28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 MTMR9Q96QG7 549 aa28.5■■■□□ 2.15
TSPAN4-207ENST00000397411 DDX11L8A8MPP1 907 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 RSPH10B2B2RC85 870 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 OR52Z1P0C646 297 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 RSPH10BP0C881 870 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 KLRC1P26715 233 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 QARSP47897 775 aaKnown RBP28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 PRKCEQ02156 737 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 RBL2Q08999 1139 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 UGCGQ16739 394 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 C9orf50Q5SZB4 431 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 MARCH8Q5T0T0 291 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 RUFY4Q6ZNE9 571 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 ZNF365Q70YC5 407 aa28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 FAM49AQ9H0Q0 323 aaPredicted RBP28.49■■■□□ 2.15
TSPAN4-207ENST00000397411 MBLAC1A4D2B0 266 aaPredicted RBP28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 ZNF862O60290 1169 aa28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 CAND2O75155 1236 aa28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 P4HBP07237 508 aaKnown RBP28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 TOB1P50616 345 aaPredicted RBP28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 TMEM266Q2M3C6 531 aa28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 XKR3Q5GH77 459 aa28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 MTHFD1LQ6UB35 978 aa28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 DNAJB3Q8WWF6 145 aa28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 RNPC3Q96LT9 517 aaKnown RBP28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.48■■■□□ 2.152e-12■□□□□ 9.2
TSPAN4-207ENST00000397411 PCDHB6Q9Y5E3 794 aa28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 PCDHA2Q9Y5H9 948 aa28.48■■■□□ 2.15
TSPAN4-207ENST00000397411 SCN5AQ14524 2016 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 PFKMP08237 780 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 CTSHP09668 335 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 ACTN1P12814 892 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 SYT1P21579 422 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 TECP42680 631 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 TMEM240Q5SV17 173 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 C16orf59Q7L2K0 433 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 SPRYD3Q8NCJ5 442 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 ZBTB10Q96DT7 871 aa28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 MTIF3Q9H2K0 278 aaKnown RBP28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 SEPT9Q9UHD8 586 aaPredicted RBP28.47■■■□□ 2.15
TSPAN4-207ENST00000397411 RPLP2P05387 115 aaKnown RBP28.46■■■□□ 2.15
TSPAN4-207ENST00000397411 BRAPQ7Z569 592 aa28.46■■■□□ 2.15
TSPAN4-207ENST00000397411 FERMT3Q86UX7 667 aa28.46■■■□□ 2.15
TSPAN4-207ENST00000397411 TPH2Q8IWU9 490 aa28.46■■■□□ 2.15
TSPAN4-207ENST00000397411 DYDC2Q96IM9 177 aa28.46■■■□□ 2.15
TSPAN4-207ENST00000397411 MAGEB2O15479 319 aa28.45■■■□□ 2.14
TSPAN4-207ENST00000397411 PTGDRQ13258 359 aa28.45■■■□□ 2.14
TSPAN4-207ENST00000397411 OTOP2Q7RTS6 562 aa28.45■■■□□ 2.14
TSPAN4-207ENST00000397411 METTL13Q8N6R0 699 aa28.45■■■□□ 2.14
TSPAN4-207ENST00000397411 EIF2AK1Q9BQI3 630 aaKnown RBP28.45■■■□□ 2.14
TSPAN4-207ENST00000397411 RGL1Q9NZL6 768 aa28.45■■■□□ 2.14
TSPAN4-207ENST00000397411 EVPLQ92817 2033 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 SMIM35A0A1B0GVV1 85 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 M0QZ92 97 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 CYP4A11Q02928 519 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 SPIRE1Q08AE8 756 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 CTTNQ14247 550 aaKnown RBP28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 MTERF2Q49AM1 385 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 IER5Q5VY09 327 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 ERMNQ8TAM6 284 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 ZSWIM4Q9H7M6 989 aa28.44■■■□□ 2.14
TSPAN4-207ENST00000397411 TRIOBPQ9H2D6 2365 aa28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 ZBBXA8MT70 800 aa28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 OTUD6AQ7L8S5 288 aa28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 RPAINQ86UA6 219 aa28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 NME8Q8N427 588 aa28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 LXNQ9BS40 222 aa28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 NIFKQ9BYG3 293 aaKnown RBP28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 RAB34Q9BZG1 259 aa28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.43■■■□□ 2.14
TSPAN4-207ENST00000397411 TANC1Q9C0D5 1861 aa28.42■■■□□ 2.14
TSPAN4-207ENST00000397411 ZBTB42B2RXF5 422 aa28.42■■■□□ 2.14
TSPAN4-207ENST00000397411 LAD1O00515 517 aa28.42■■■□□ 2.14
TSPAN4-207ENST00000397411 STX6O43752 255 aa28.42■■■□□ 2.14
TSPAN4-207ENST00000397411 TMOD1P28289 359 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms