RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 GJA5P36382 358 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 ERO1BQ86YB8 467 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 CCDC50Q8IVM0 306 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 IFT20Q8IY31 132 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 HVCN1Q96D96 273 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
FGFR1-208ENST00000397108 FOXP1Q9H334 677 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-208ENST00000397108 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 WBP1LQ9NX94 342 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 MCM9Q9NXL9 1143 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 ZSWIM5Q9P217 1185 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 LGALS16A8MUM7 142 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 ATP6V1G2O95670 118 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 SCYL3Q8IZE3 742 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 CRACR2BQ8N4Y2 399 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-208ENST00000397108 TRIM58Q8NG06 486 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 SERPINB13Q9UIV8 391 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 NKRFO15226 690 aaKnown RBP eCLIP12.91□□□□□ -0.34
FGFR1-208ENST00000397108 ELF3P78545 371 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-208ENST00000397108 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
FGFR1-208ENST00000397108 SNX1Q13596 522 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 MICAL1Q8TDZ2 1067 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 CASKIN2Q8WXE0 1202 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 KRT12Q99456 494 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 SPATS2LQ9NUQ6 558 aaKnown RBP12.91□□□□□ -0.34
FGFR1-208ENST00000397108 SALL4Q9UJQ4 1053 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 HYOU1Q9Y4L1 999 aa12.91□□□□□ -0.34
FGFR1-208ENST00000397108 BYSLQ13895 437 aaKnown RBP12.9□□□□□ -0.34
FGFR1-208ENST00000397108 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
FGFR1-208ENST00000397108 SLC4A8Q2Y0W8 1093 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 PURBQ96QR8 312 aaKnown RBP12.9□□□□□ -0.34
FGFR1-208ENST00000397108 NUP58Q9BVL2 599 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 PTPRFP10586 1907 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 GOLGA6L10A6NI86 522 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 GSG1L2A8MUP6 293 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 MYBL1P10243 752 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 PPATQ06203 517 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 SREBF2Q12772 1141 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 PPIL2Q13356 520 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 DRP2Q13474 957 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 RTN1Q16799 776 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 AP1ARQ63HQ0 302 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 CPLX4Q7Z7G2 160 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 WASF1Q92558 559 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 SHISA4Q96DD7 197 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 PLIN2Q99541 437 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 CNOT8Q9UFF9 292 aaKnown RBP12.9□□□□□ -0.34
FGFR1-208ENST00000397108 PCDHA13Q9Y5I0 950 aa12.9□□□□□ -0.34
FGFR1-208ENST00000397108 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 IFNAR1P17181 557 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 CAP2P40123 477 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 MEA1Q16626 185 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 YIPF3Q9GZM5 350 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 DCDC2CA8MYV0 355 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 HMGB1P1B2RPK0 211 aaPredicted RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 MGRN1O60291 552 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 ANP32DO95626 131 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 RPN1P04843 607 aaKnown RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 HSPA1AP0DMV8 641 aaKnown RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 HSPA1BP0DMV9 641 aaKnown RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 TM4SF4P48230 202 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 GABPAQ06546 454 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 PAK2Q13177 524 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 RRP1BQ14684 758 aaKnown RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 TBC1D1Q86TI0 1168 aaPredicted RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 KLHL7Q8IXQ5 586 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 RAPGEF5Q92565 580 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 CUL5Q93034 780 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 SH2D4AQ9H788 454 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 SLC39A2Q9NP94 309 aa12.89□□□□□ -0.35
FGFR1-208ENST00000397108 MAGEC2Q9UBF1 373 aaPredicted RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 ARPP21Q9UBL0 812 aaPredicted RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 PACSIN2Q9UNF0 486 aaPredicted RBP12.89□□□□□ -0.35
FGFR1-208ENST00000397108 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 CYP2D6P10635 497 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 PTPRAP18433 802 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 THEMIS2Q5TEJ8 643 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 BZW1Q7L1Q6 419 aaKnown RBP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 TACC3Q9Y6A5 838 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 USP17L12C9JPN9 530 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 USP17L21D6R901 530 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 GCOM1H8Y6P7 765 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 CA12O43570 354 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 MYZAPP0CAP1 466 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 TCP1P17987 556 aaKnown RBP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 GTF2A2P52657 109 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 PTGDRQ13258 359 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms