RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 GRM4Q14833 912 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 SYCE2Q6PIF2 218 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 UBALD2Q8IYN6 164 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 TMEM105Q8N8V8 129 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 KREMEN2Q8NCW0 462 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 UBAC1Q9BSL1 405 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 TMX1Q9H3N1 280 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 CNNM2Q9H8M5 875 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 AAASQ9NRG9 546 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 ZBTB47Q9UFB7 747 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-202ENST00000396629 IGSF9BQ9UPX0 1349 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 ATP9AO75110 1047 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 FGF18O76093 207 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 KCNA2P16389 499 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 MARK3P27448 753 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 SARSP49591 514 aaKnown RBP9.72□□□□□ -0.85
SCFD1-202ENST00000396629 NLRX1Q86UT6 975 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 DSCC1Q9BVC3 393 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 SMARCAD1Q9H4L7 1026 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 LRFN2Q9ULH4 789 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 SORCS3Q9UPU3 1222 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 KDM3AQ9Y4C1 1321 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 FAM186AA6NE01 2351 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 SRGAP2BP0DMP2 458 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 INSRRP14616 1297 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 HOXB8P17481 243 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-202ENST00000396629 TECP42680 631 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 ID4P47928 161 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 PAK2Q13177 524 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 IMMTQ16891 758 aaKnown RBP9.72□□□□□ -0.85
SCFD1-202ENST00000396629 CYB5R4Q7L1T6 521 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 ZBTB33Q86T24 672 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 COLGALT1Q8NBJ5 622 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 RILPL2Q969X0 211 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 GPRASP2Q96D09 838 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 ZBTB10Q96DT7 871 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 CELF4Q9BZC1 486 aaKnown RBP9.72□□□□□ -0.85
SCFD1-202ENST00000396629 LZTS1Q9Y250 596 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 PCDHB7Q9Y5E2 793 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 PCDHA2Q9Y5H9 948 aa9.72□□□□□ -0.85
SCFD1-202ENST00000396629 M0QZ92 97 aa9.71□□□□□ -0.86
SCFD1-202ENST00000396629 BRD1O95696 1058 aa9.71□□□□□ -0.86
SCFD1-202ENST00000396629 IGBP1P78318 339 aa9.71□□□□□ -0.86
SCFD1-202ENST00000396629 MTMR3Q13615 1198 aa9.71□□□□□ -0.86
SCFD1-202ENST00000396629 SPOUT1Q5T280 376 aaKnown RBP9.71□□□□□ -0.86
SCFD1-202ENST00000396629 ASTLQ6HA08 431 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-202ENST00000396629 GLG1Q92896 1179 aa9.71□□□□□ -0.86
SCFD1-202ENST00000396629 PCYT2Q99447 389 aa9.71□□□□□ -0.86
SCFD1-202ENST00000396629 FAM49AQ9H0Q0 323 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-202ENST00000396629 PIK3CDO00329 1044 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 MEIS2O14770 477 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 MGEA5O60502 916 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 PLCB3Q01970 1234 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 MCTP2Q6DN12 878 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 USP17L6PQ6QN14 398 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 FRMD5Q7Z6J6 570 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 NME8Q8N427 588 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 SMARCC2Q8TAQ2 1214 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 NKD2Q969F2 451 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-202ENST00000396629 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 CWH43Q9H720 699 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 ERVK-5Q9HDB9 667 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 TMEM260Q9NX78 707 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 EVPLQ92817 2033 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 RIF1Q5UIP0 2472 aaKnown RBP9.7□□□□□ -0.86
SCFD1-202ENST00000396629 MYO15AQ9UKN7 3530 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 SMIM35A0A1B0GVV1 85 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 TBKBP1A7MCY6 615 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 C2CD4DB7Z1M9 353 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 CLCN5P51795 746 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 TMEM62Q0P6H9 643 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 FAM102BQ5T8I3 360 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 PLPP4Q5VZY2 271 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 THNSL1Q8IYQ7 743 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 ADSSL1Q8N142 457 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 MRPS27Q92552 414 aaKnown RBP9.7□□□□□ -0.86
SCFD1-202ENST00000396629 CUL5Q93034 780 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 APOL5Q9BWW9 433 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 RGS18Q9NS28 235 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 C1orf112Q9NSG2 853 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 TYW1Q9NV66 732 aaKnown RBP9.7□□□□□ -0.86
SCFD1-202ENST00000396629 UBIAD1Q9Y5Z9 338 aa9.7□□□□□ -0.86
SCFD1-202ENST00000396629 C9IYK1 514 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 ITGB5P18084 799 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 LAG3P18627 525 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 SP100P23497 879 aaPredicted RBP9.69□□□□□ -0.86
SCFD1-202ENST00000396629 FAM189BP81408 668 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 KRT76Q01546 638 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 APOBRQ0VD83 1088 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 TROAPQ12815 778 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 TMEM266Q2M3C6 531 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 TPRNQ4KMQ1 711 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 CWC27Q6UX04 472 aaKnown RBP9.69□□□□□ -0.86
SCFD1-202ENST00000396629 TNPO1Q92973 898 aaKnown RBP9.69□□□□□ -0.86
SCFD1-202ENST00000396629 NECTIN4Q96NY8 510 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 POMKQ9H5K3 350 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 NGRNQ9NPE2 291 aaKnown RBP9.69□□□□□ -0.86
SCFD1-202ENST00000396629 HCSTQ9UBK5 93 aa9.69□□□□□ -0.86
SCFD1-202ENST00000396629 DENND4AQ7Z401 1863 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms