RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PTK2Q05397 1052 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 GRB10Q13322 594 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 CALCRLQ16602 461 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 NEK8Q86SG6 692 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 MYOCDQ8IZQ8 938 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 CCDC197Q8NCU1 140 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 BRIP1Q9BX63 1249 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 COL4A3BPQ9Y5P4 624 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 RAD21O60216 631 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 LCA5LO95447 670 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 TDP2O95551 362 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 SHBGP04278 402 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 CHN1P15882 459 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 SLC9A1P19634 815 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 ABCB4P21439 1286 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 PLTPP55058 493 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 ZNF211Q13398 564 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 DCAF17Q5H9S7 520 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 MAEAQ7L5Y9 396 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 MREGQ8N565 214 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 NSMCE1Q8WV22 266 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 COA7Q96BR5 231 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 PSMD1Q99460 953 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 BLOC1S4Q9NUP1 217 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 SSU72P8A0A1W2PR75 194 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 KLRG2A4D1S0 409 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 PGRMC1O00264 195 aaKnown RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 MMEP08473 750 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 TNNI2P48788 182 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 ELF3P78545 371 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 BYSLQ13895 437 aaKnown RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 LRRC14Q15048 493 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 HERC4Q5GLZ8 1057 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 UNC13DQ70J99 1090 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 KIF2BQ8N4N8 673 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 GLG1Q92896 1179 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 CEP72Q9P209 647 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 MAD2L2Q9UI95 211 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 NR2E1Q9Y466 385 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 BAZ2AQ9UIF9 1905 aaKnown RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 SPDYE3A6NKU9 549 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 H0YGN5 161 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 ATP6V1G2O95670 118 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 GCKP35557 465 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 CCDC25Q86WR0 208 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 TEX11Q8IYF3 940 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 LRRC34Q8IZ02 419 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 MICAL1Q8TDZ2 1067 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 U2AF1L4Q8WU68 220 aaKnown RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 DYDC1Q8WWB3 177 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 CHMP6Q96FZ7 201 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 RSRC1Q96IZ7 334 aaKnown RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 XPO6Q96QU8 1125 aaKnown RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 TRIM6Q9C030 488 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 BARHL2Q9NY43 387 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 SNX24Q9Y343 169 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 UTP11Q9Y3A2 253 aaKnown RBP10.73□□□□□ -0.69
TRIM39-203ENST00000396547 NFS1Q9Y697 457 aa10.73□□□□□ -0.69
TRIM39-203ENST00000396547 CCT8L1PA6NM43 557 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 F8W031 263 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 POLRMTO00411 1230 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 FGGP02679 453 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 KRT13P13646 458 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 DRD4P21917 467 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 ECHS1P30084 290 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 EIF6P56537 245 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 IFI35P80217 286 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 FKBP3Q00688 224 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 ADCY1Q08828 1119 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 PLCB4Q15147 1175 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 KRT79Q5XKE5 535 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 GJB7Q6PEY0 223 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 LRRC55Q6ZSA7 311 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 OTUD6AQ7L8S5 288 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 DZIP1Q86YF9 867 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 ANKS4BQ8N8V4 417 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 PRCCQ92733 491 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 TATDN2Q93075 761 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 PNMA5Q96PV4 448 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 PIGSQ96S52 555 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 CUEDC2Q9H467 287 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 C6orf50Q9HD87 102 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 DICER1Q9UPY3 1922 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 FRMPD2Q68DX3 1309 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 ATXN2Q99700 1313 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 UTRNP46939 3433 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 SLC37A4O43826 429 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 SLC8A1P32418 973 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 ADAM9Q13443 819 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 BIRC3Q13489 604 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 WLSQ5T9L3 541 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 ALKBH5Q6P6C2 394 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 ZNF571Q7Z3V5 609 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 GUF1Q8N442 669 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 KCNV2Q8TDN2 545 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 FAM84BQ96KN1 310 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 PRMT1Q99873 361 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 FAM167BQ9BTA0 163 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms