RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ZNF174Q15697 407 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 HSP90B2PQ58FF3 399 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 TCP11X2Q5H9J9 407 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 RRAGBQ5VZM2 374 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 MSL1Q68DK7 614 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 LRRC55Q6ZSA7 311 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 OTOP1Q7RTM1 612 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 ZNF572Q7Z3I7 529 aaPredicted RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 EGFL6Q8IUX8 553 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 CMTR1Q8N1G2 835 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 SHCBP1Q8NEM2 672 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 DNERQ8NFT8 737 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 AFAP1L1Q8TED9 768 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 GPRASP2Q96D09 838 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 KCTD10Q9H3F6 313 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 ACBD3Q9H3P7 528 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 C17orf75Q9HAS0 396 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 MYH11P35749 1972 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 PDCD11Q14690 1871 aaKnown RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 TMEM232C9JQI7 657 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 CXCL11O14625 94 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 BACE1P56817 501 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 GOLGA8FQ08AF8 430 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 GOLGA8DPQ0D2H9 430 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 EPHA7Q15375 998 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 SPECC1LQ69YQ0 1117 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 CALML4Q96GE6 196 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 SLF1Q9BQI6 1058 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 PDGFDQ9GZP0 370 aaPredicted RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 MRPL44Q9H9J2 332 aaKnown RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 JADE2Q9NQC1 790 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 PDLIM7Q9NR12 457 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 ZNF277Q9NRM2 450 aaPredicted RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 GABBR1Q9UBS5 961 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 PCDHA1Q9Y5I3 950 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 GFPT2O94808 682 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 ZNF16P17020 682 aaPredicted RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 PLCG1P19174 1290 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 STAT6P42226 847 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 EIF6P56537 245 aaKnown RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 MOGSQ13724 837 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 TTLL12Q14166 644 aaPredicted RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 C9orf131Q5VYM1 1079 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 TTBK2Q6IQ55 1244 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 CATSPERGQ6ZRH7 1159 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 LRRC47Q8N1G4 583 aaKnown RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 CHST13Q8NET6 341 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 JDP2Q8WYK2 163 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 LARP4BQ92615 738 aaKnown RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 CCDC102AQ96A19 550 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 PURBQ96QR8 312 aaKnown RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 FIZ1Q96SL8 496 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 MXRA8Q9BRK3 442 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 NTPCRQ9BSD7 190 aaKnown RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 ADARB2Q9NS39 739 aaKnown RBP5.91□□□□□ -1.46
VPS41-203ENST00000395969 EMILIN3Q9NT22 766 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 DMAC2Q9NW81 257 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 PCDHAC2Q9Y5I4 1007 aa5.91□□□□□ -1.46
VPS41-203ENST00000395969 A0A0G2JLL6 359 aaPredicted RBP5.9□□□□□ -1.46
VPS41-203ENST00000395969 G3V3G9 751 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 PTPRAP18433 802 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 SFNP31947 248 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 MCM7P33993 719 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 NKX3-2P78367 333 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 SV2BQ7L1I2 683 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 PRRT2Q7Z6L0 340 aaPredicted RBP5.9□□□□□ -1.46
VPS41-203ENST00000395969 DEFB132Q7Z7B7 95 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 KIAA0895Q8NCT3 520 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 ERMNQ8TAM6 284 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 P2RX5Q93086 422 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 FAXDC2Q96IV6 333 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 NUCKS1Q9H1E3 243 aaKnown RBP5.9□□□□□ -1.46
VPS41-203ENST00000395969 PLCB1Q9NQ66 1216 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 ANKEF1Q9NU02 776 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 FAM184BQ9ULE4 1060 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 CAPN11Q9UMQ6 739 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 FAM169AQ9Y6X4 670 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 CASP8AP2Q9UKL3 1982 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 ZNF541Q9H0D2 1346 aa5.9□□□□□ -1.46
VPS41-203ENST00000395969 GCOM1H8Y6P7 765 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 PPP1R12AO14974 1030 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 FOXN1O15353 648 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 CCNT1O60563 726 aaKnown RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 STBD1O95210 358 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 SERPINC1P01008 464 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 POLR2MP0CAP2 368 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 FNTAP49354 379 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 LIG3P49916 1009 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 ATP2B2Q01814 1243 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 PPATQ06203 517 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 PICALMQ13492 652 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 C11orf91Q3C1V1 193 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 MIIPQ5JXC2 388 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 LDLRAD1Q5T700 205 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 FBXW10Q5XX13 1052 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 RASGRP2Q7LDG7 609 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 ZNF467Q7Z7K2 595 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 RAB11FIP4Q86YS3 637 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 C4orf19Q8IY42 314 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 PIK3R5Q8WYR1 880 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms