RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 PACS1Q6VY07 963 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 PPP1R42Q7Z4L9 355 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 CASKIN2Q8WXE0 1202 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 NUDCD1Q96RS6 583 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 OSBPL10Q9BXB5 764 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 FAM114A2Q9NRY5 505 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 RBM12Q9NTZ6 932 aaKnown RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 KCNH3Q9ULD8 1083 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 TFR2Q9UP52 801 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 KCPQ6ZWJ8 1503 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 MED23Q9ULK4 1368 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 ESYT3A0FGR9 886 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 SIGLEC16A6NMB1 481 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 TACC1O75410 805 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 DDX58O95786 925 aaKnown RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 LDHAP00338 332 aaKnown RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 CCNB1P14635 433 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 FLT3P36888 993 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 CDK17Q00537 523 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 DIXDC1Q155Q3 683 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 HLFQ16534 295 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 GSTA3Q16772 222 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 IMMTQ16891 758 aaKnown RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 CCDC152Q4G0S7 254 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 LIN52Q52LA3 116 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 DQX1Q8TE96 717 aaKnown RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 FERMT2Q96AC1 680 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 CLIP3Q96DZ5 547 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 OLFM3Q96PB7 478 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 TUBGCP5Q96RT8 1024 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 ARHGEF38Q9NXL2 777 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 PA2G4Q9UQ80 394 aaKnown RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 N6AMT1Q9Y5N5 214 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 MAP3K15Q6ZN16 1313 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 ACTN4O43707 911 aaKnown RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 TPPPO94811 219 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 STARD3NLO95772 234 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 LMNAP02545 664 aaKnown RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 POTEJP0CG39 1038 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 CYP19A1P11511 503 aaPredicted RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 CYLC1P35663 651 aaPredicted RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 VHLP40337 213 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 DHX9Q08211 1270 aaKnown RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 NSUN2Q08J23 767 aaKnown RBP eCLIP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 TSR1Q2NL82 804 aaKnown RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 EPHA10Q5JZY3 1008 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 C3orf67Q6ZVT6 689 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 DAAM2Q86T65 1068 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 SLC17A8Q8NDX2 589 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 OR2W6PQ8NHA6 318 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 LACRTQ9GZZ8 138 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 BHMT2Q9H2M3 363 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 NMRK1Q9NWW6 199 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 TRPC5Q9UL62 973 aaPredicted RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 USP15Q9Y4E8 981 aaPredicted RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 NEURL1BA8MQ27 555 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 FOXN1O15353 648 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 TIMM44O43615 452 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 OAS1P00973 400 aaKnown RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 CDC25AP30304 524 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 OCRLQ01968 901 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 MTMR3Q13615 1198 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 BCL2A1Q16548 175 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 ZNF827Q17R98 1081 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 SOGA3Q5TF21 947 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 SLC2A7Q6PXP3 512 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 PDCD7Q8N8D1 485 aaKnown RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 MDM1Q8TC05 714 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 SREK1Q8WXA9 508 aaKnown RBP10.5□□□□□ -0.73
CDRT1-204ENST00000395906 TLCD1Q96CP7 247 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 KAZALD1Q96I82 304 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 SUCLG2Q96I99 432 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 CCDC134Q9H6E4 229 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 IL1RAPL1Q9NZN1 696 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 STOML1Q9UBI4 398 aa10.5□□□□□ -0.73
CDRT1-204ENST00000395906 A0A0D9SFI3 127 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 BTBD19C9JJ37 291 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 SNX3O60493 162 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 WASHC2DQ5SRD0 308 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 ZNF362Q5T0B9 420 aaPredicted RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 ATXN2LQ8WWM7 1075 aaKnown RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 ATP6V0A1Q93050 837 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 NLRP3Q96P20 1036 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 SETDB2Q96T68 719 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 DNAJC7Q99615 494 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 DDX23Q9BUQ8 820 aaKnown RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 METTL22Q9BUU2 404 aaPredicted RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 THAP9Q9H5L6 903 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 RETREG1Q9H6L5 497 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 RNF14Q9UBS8 474 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 MYPNQ86TC9 1320 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 A0A087WZG4 1122 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 MACROD2A1Z1Q3 448 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 RCCD1A6NED2 376 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 ZSCAN5CA6NGD5 496 aaPredicted RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 GRM8O00222 908 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 O00370 1275 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 SUN1O94901 812 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms