RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 STAT5BP51692 787 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 ERVK-21P61565 698 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 SCRN1Q12765 414 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 STK3Q13188 491 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 FBXO47Q5MNV8 452 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 REXO1Q8N1G1 1221 aaKnown RBP10.08□□□□□ -0.8
ATG4A-205ENST00000394892 CRIPAKQ8N1N5 446 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 TOP1MTQ969P6 601 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 C17orf80Q9BSJ5 609 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 GLT8D2Q9H1C3 349 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 SUGCTQ9HAC7 445 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 CDHR5Q9HBB8 845 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 C6orf50Q9HD87 102 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 PDRG1Q9NUG6 133 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 TUBE1Q9UJT0 475 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 CDY2AQ9Y6F7 541 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 DOCK5Q9H7D0 1870 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 MSH4O15457 936 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 ZNF862O60290 1169 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 ZNF76P36508 570 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 TMEM62Q0P6H9 643 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 ST3GAL1Q11201 340 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 PRR16Q569H4 304 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 SWSAP1Q6NVH7 229 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 TAF2Q6P1X5 1199 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 B3GNT9Q6UX72 402 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 KIAA0319LQ8IZA0 1049 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 MYOCDQ8IZQ8 938 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 GDPD5Q8WTR4 605 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 SEPT8Q92599 483 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 SDF4Q9BRK5 362 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 FAM49AQ9H0Q0 323 aaPredicted RBP10.07□□□□□ -0.8
ATG4A-205ENST00000394892 RC3H2Q9HBD1 1191 aaKnown RBP10.07□□□□□ -0.8
ATG4A-205ENST00000394892 LMCD1Q9NZU5 365 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 MTUS1Q9ULD2 1270 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 KCNJ14Q9UNX9 436 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 MYH7BA7E2Y1 1941 aa10.07□□□□□ -0.8
ATG4A-205ENST00000394892 TRIP12Q14669 1992 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-205ENST00000394892 POTEB3A0JP26 581 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 RRN3P2A6NIE6 340 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 ENPP3O14638 875 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 PFKFB2O60825 505 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 EFCAB14O75071 495 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 STBD1O95210 358 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 TDP2O95551 362 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 NEFLP07196 543 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 FDPSP14324 419 aaKnown RBP10.06□□□□□ -0.8
ATG4A-205ENST00000394892 GNA11P29992 359 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 CD52P31358 61 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 MRPS6P82932 125 aaKnown RBP10.06□□□□□ -0.8
ATG4A-205ENST00000394892 UGCGQ16739 394 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 EARS2Q5JPH6 523 aaKnown RBP10.06□□□□□ -0.8
ATG4A-205ENST00000394892 ERICH6BQ5W0A0 696 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 POTEBQ6S5H4 581 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 MTHFD1LQ6UB35 978 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 OXER1Q8TDS5 423 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 TBCKQ8TEA7 893 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 ATP8B4Q8TF62 1192 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 TMEM40Q8WWA1 233 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 SLC5A5Q92911 643 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 MBOAT7Q96N66 472 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 ZNF577Q9BSK1 485 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 LRFN3Q9BTN0 628 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 IFIH1Q9BYX4 1025 aaKnown RBP10.06□□□□□ -0.8
ATG4A-205ENST00000394892 TMX1Q9H3N1 280 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 SH3GLB2Q9NR46 395 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 PCDHA4Q9UN74 947 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 TRPC6Q9Y210 931 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 MAFBQ9Y5Q3 323 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-205ENST00000394892 GBF1Q92538 1859 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 COL4A6Q14031 1691 aa10.06□□□□□ -0.8
ATG4A-205ENST00000394892 CYP3A7-CYP3A51PA0A087WV96 503 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 MGEA5O60502 916 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 UPP2O95045 317 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 DEXIO95424 95 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 C22orf31O95567 290 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 AMHP03971 560 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 CYP3A7P24462 503 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 KLRC1P26715 233 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 AK2P54819 239 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 NLRP5P59047 1200 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
ATG4A-205ENST00000394892 TMEM266Q2M3C6 531 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 ZNF746Q6NUN9 644 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-205ENST00000394892 PDXDC2PQ6P474 469 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 LINC01465Q8N7H1 131 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 NECAB1Q8N987 351 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 DAGLBQ8NCG7 672 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 CCDC12Q8WUD4 166 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-205ENST00000394892 TGS1Q96RS0 853 aaKnown RBP10.05□□□□□ -0.8
ATG4A-205ENST00000394892 CEP89Q96ST8 783 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 UNC45AQ9H3U1 944 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 EPHX3Q9H6B9 360 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 AZI2Q9H6S1 392 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 ZNF302Q9NR11 478 aa10.05□□□□□ -0.8
ATG4A-205ENST00000394892 PRRC2BQ5JSZ5 2229 aaKnown RBP10.05□□□□□ -0.8
ATG4A-205ENST00000394892 SMIM35A0A1B0GVV1 85 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 TMEM150BA6NC51 233 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms