RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TWF2Q6IBS0 349 aaKnown RBP11.19□□□□□ -0.62
COL4A6-203ENST00000394872 TRIM42Q8IWZ5 723 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 LRRC43Q8N309 656 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 MMP19Q99542 508 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 CCHCR1Q8TD31 782 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 CHAMP1Q96JM3 812 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 NHEJ1Q9H9Q4 299 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-203ENST00000394872 EPB41L5Q9HCM4 733 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
COL4A6-203ENST00000394872 MOSPD1Q9UJG1 213 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 GSTA4O15217 222 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 CCNE1P24864 410 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 PSMA2P25787 234 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 NFKBIAP25963 317 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 PHKA2P46019 1235 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 PRELPP51888 382 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 C2orf54Q08AI8 447 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 ZNF667Q5HYK9 610 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 IKBKBO14920 756 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 ZBTB5O15062 677 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 HOXD10P28358 340 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 SPOPLQ6IQ16 392 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 MINPP1Q9UNW1 487 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 GNGT2O14610 69 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 ZBED1O96006 694 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 CXCR5P32302 372 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 LIFRP42702 1097 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 KCTD16Q68DU8 428 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 PPP4R3CPQ6ZMV5 832 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 C11orf57Q6ZUT1 292 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 SPATS2Q86XZ4 545 aaKnown RBP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 PBKQ96KB5 322 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 TTC37Q6PGP7 1564 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 H7C1W4 665 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 EIF4A3P38919 411 aaKnown RBP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 IFNAR2P48551 515 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 ZSCAN26Q16670 478 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 CDC26Q8NHZ8 85 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 CDC23Q9UJX2 597 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 ATP8A1Q9Y2Q0 1164 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 HECW2Q9P2P5 1572 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 CLDN3O15551 220 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 PPARGP37231 505 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 SCN4BQ8IWT1 228 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 STAG1Q8WVM7 1258 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 PSPC1Q8WXF1 523 aaKnown RBP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 MED4Q9NPJ6 270 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 SPATA31A3Q5VYP0 1347 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 PRR36Q9H6K5 1346 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 SUN1O94901 812 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 MAPK6Q16659 721 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 BCAS4Q8TDM0 211 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 AIFM3Q96NN9 605 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 GDAQ9Y2T3 454 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 PCDHA13Q9Y5I0 950 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 FAM196BA6NMK8 535 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 ZBBXA8MT70 800 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 DPYSL4O14531 572 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 TOM1L1O75674 476 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 TSPY1Q01534 308 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 TMTC3Q6ZXV5 915 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 PCGF5Q86SE9 256 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 DGKHQ86XP1 1220 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 MTRQ99707 1265 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 CD209Q9NNX6 404 aa11.18□□□□□ -0.62
COL4A6-203ENST00000394872 TOPORSQ9NS56 1045 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 SAMSN1Q9NSI8 373 aaKnown RBP11.18□□□□□ -0.62
COL4A6-203ENST00000394872 USP17L10C9JJH3 530 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 SMIM24O75264 130 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 MT-ND3P03897 115 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 LRRC63Q05C16 580 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 ZNF568Q3ZCX4 644 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 HP1BP3Q5SSJ5 553 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 TTC30BQ8N4P2 665 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 RNF217Q8TC41 542 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 ZNF302Q9NR11 478 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 A0A087WWV3 80 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 TTLL4Q14679 1199 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 STRBPQ96SI9 672 aaKnown RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 CDR2Q01850 454 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 MFSD14CQ5VZR4 134 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 BZW1Q7L1Q6 419 aaKnown RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 TTC25Q96NG3 672 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 CDK12Q9NYV4 1490 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 EVI5O60447 810 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 PRDX5P30044 214 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 RECQLP46063 649 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 ZNF394Q53GI3 561 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 ARL6IP4Q66PJ3 421 aaKnown RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 FGD4Q96M96 766 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 GPC3P51654 580 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 PODNQ7Z5L7 613 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 ACRBPQ8NEB7 543 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 MMTAG2Q9BU76 263 aaKnown RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 PDE11AQ9HCR9 933 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms