RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 KLHL23Q8NBE8 558 aa17.62■□□□□ 0.41
CHMP3-202ENST00000393773 TRAPPC12Q8WVT3 735 aa17.62■□□□□ 0.41
CHMP3-202ENST00000393773 PADI3Q9ULW8 664 aa17.62■□□□□ 0.41
CHMP3-202ENST00000393773 RBM8AQ9Y5S9 174 aaKnown RBP17.62■□□□□ 0.41
CHMP3-202ENST00000393773 KDM3AQ9Y4C1 1321 aa17.62■□□□□ 0.41
CHMP3-202ENST00000393773 hCG_1642624A0A1W2PR95 340 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 SCG2P13521 617 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 GNAQP50148 359 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 GATMP50440 423 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 COASYQ13057 564 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 PAK2Q13177 524 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 PLCB4Q15147 1175 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 IER5Q5VY09 327 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 TMX1Q9H3N1 280 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 SLC9A2Q9UBY0 812 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 PCDHA6Q9UN73 950 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 PCDHGC5Q9Y5F6 944 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 PCDHA8Q9Y5H6 950 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 PCDHA2Q9Y5H9 948 aa17.61■□□□□ 0.41
CHMP3-202ENST00000393773 CFAP54Q96N23 3096 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 SPDYE3A6NKU9 549 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 LOC730098B7Z3J9 87 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 CASC1Q6TDU7 716 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 POF1BQ8WVV4 589 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 EDAQ92838 391 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 PPP2R3CQ969Q6 453 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 MFSD14AQ96MC6 490 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 KCNH7Q9NS40 1196 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 BARX2Q9UMQ3 279 aaPredicted RBP17.6■□□□□ 0.41
CHMP3-202ENST00000393773 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 NFASCO94856 1347 aa17.6■□□□□ 0.41
CHMP3-202ENST00000393773 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 M0QZ92 97 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 MAFGO15525 162 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 MGEA5O60502 916 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 STAG3L1P0CL83 205 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 NRIP1P48552 1158 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 ACTR2P61160 394 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 RAB11FIP4Q86YS3 637 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 PRSS33Q8NF86 280 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 TMEM87BQ96K49 555 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 CELF4Q9BZC1 486 aaKnown RBP17.59■□□□□ 0.41
CHMP3-202ENST00000393773 AZI2Q9H6S1 392 aa17.59■□□□□ 0.41
CHMP3-202ENST00000393773 SMIM35A0A1B0GVV1 85 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 CCDC69A6NI79 296 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 CALM1P0DP23 149 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 CALM2P0DP24 149 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 CALM3P0DP25 149 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 MCM5P33992 734 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 LIFRP42702 1097 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 ITGB3BPQ13352 177 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-202ENST00000393773 CBX2Q14781 532 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-202ENST00000393773 TYW1BQ6NUM6 668 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 PLPPR4Q7Z2D5 763 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 BMP8AQ7Z5Y6 402 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 CYP2W1Q8TAV3 490 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 MXRA8Q9BRK3 442 aa17.58■□□□□ 0.4
CHMP3-202ENST00000393773 USP15Q9Y4E8 981 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-202ENST00000393773 MYO15AQ9UKN7 3530 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 CACNA1HO95180 2353 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 SARSP49591 514 aaKnown RBP17.57■□□□□ 0.4
CHMP3-202ENST00000393773 TMEM266Q2M3C6 531 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 WWC2Q6AWC2 1192 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 MTHFD1LQ6UB35 978 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 HEATR3Q7Z4Q2 680 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 VN1R2Q8NFZ6 395 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 PHOX2BQ99453 314 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 ERVK-5Q9HDB9 667 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 HCSTQ9UBK5 93 aa17.57■□□□□ 0.4
CHMP3-202ENST00000393773 PLXNA3P51805 1871 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 IGKV6D-21A0A0A0MT36 114 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 TMEM221A6NGB7 291 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 M0R296 226 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 ARP10275 920 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 STAT5BP51692 787 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 KRT76Q01546 638 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 TRIM67Q6ZTA4 783 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 RBM23Q86U06 439 aaKnown RBP17.56■□□□□ 0.4
CHMP3-202ENST00000393773 TMTC2Q8N394 836 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 CCDC82Q8N4S0 544 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 TMEM40Q8WWA1 233 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 PGBD1Q96JS3 809 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 SDF4Q9BRK5 362 aa17.56■□□□□ 0.4
CHMP3-202ENST00000393773 LSG1Q9H089 658 aaKnown RBP17.56■□□□□ 0.4
CHMP3-202ENST00000393773 AGO4Q9HCK5 861 aaKnown RBP17.56■□□□□ 0.4
CHMP3-202ENST00000393773 DENND4AQ7Z401 1863 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 ATG7O95352 703 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 CCNE2O96020 404 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 SLC26A2P50443 739 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 ZXDAP98168 799 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 RBM10P98175 930 aaKnown RBP17.55■□□□□ 0.4
CHMP3-202ENST00000393773 UBE3AQ05086 875 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 CEP55Q53EZ4 464 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 PPP1R18Q6NYC8 613 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 SGMS1Q86VZ5 419 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 MICU3Q86XE3 530 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 NME8Q8N427 588 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 FANCBQ8NB91 859 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms