RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 TSEN34Q9BSV6 310 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 MTG1Q9BT17 334 aaPredicted RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 RNF208Q9H0X6 261 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 UPF3AQ9H1J1 476 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 DACT1Q9NYF0 836 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 DBR1Q9UK59 544 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 ZNFX1Q9P2E3 1918 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 IGSF9BQ9UPX0 1349 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 IGKV6D-21A0A0A0MT36 114 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 POTEB3A0JP26 581 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 H3BRB1 525 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 EML1O00423 815 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 MAGEB2O15479 319 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 LGR5O75473 907 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 DGAT1O75907 488 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 LGALS2P05162 132 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 MYL3P08590 195 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 PLA2G4BP0C869 781 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 HOXD8P13378 290 aaPredicted RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 SCP2P22307 547 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 CDC25AP30304 524 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 RFC5P40937 340 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 CDC42EP1Q00587 391 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 PRKCEQ02156 737 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 GRIN1Q05586 938 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 CTTNQ14247 550 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 IL17AQ16552 155 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 HSDL1Q3SXM5 330 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 TMEM119Q4V9L6 283 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 XKR9Q5GH70 373 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 ZNF484Q5JVG2 852 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 POTEBQ6S5H4 581 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 STXBP4Q6ZWJ1 553 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 FMR1NBQ8N0W7 255 aaPredicted RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 TCP11Q8WWU5 503 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 RAD54LQ92698 747 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 GJA10Q969M2 543 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 VTI1AQ96AJ9 217 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 CEP170P1Q96L14 293 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 DRC1Q96MC2 740 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 PANK2Q9BZ23 570 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 TUT1Q9H6E5 874 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 RGL1Q9NZL6 768 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 SEPT9Q9UHD8 586 aaPredicted RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 MAFBQ9Y5Q3 323 aaPredicted RBP3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 MGAMO43451 1857 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 PLXNA1Q9UIW2 1896 aa3.94□□□□□ -1.78
ATP2B1-203ENST00000393164 COL1A2P08123 1366 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 PHLPP2Q6ZVD8 1323 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 SYNRGQ9UMZ2 1314 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 GSTTP1A0A1W2PQM5 241 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 POTEFA5A3E0 1075 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 PP2D1A8MPX8 630 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 H0YCG3 227 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 GTPBP6O43824 516 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 SORBS3O60504 671 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 GADD45BO75293 160 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 MED24O75448 989 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 CCL5P13501 91 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 CCND3P30281 292 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 PPP1R2P41236 205 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 POLGP54098 1239 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 NKX3-2P78367 333 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 TBC1D8BQ0IIM8 1120 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 GRB10Q13322 594 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 POSTNQ15063 836 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 POTEGQ6S5H5 508 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 CCDC60Q8IWA6 550 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 CCDC65Q8IXS2 484 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 C7orf31Q8N865 590 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 SYT2Q8N9I0 419 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 SH3TC2Q8TF17 1288 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 COPS5Q92905 334 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 SMARCE1Q969G3 411 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 ARMC5Q96C12 935 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 MMTAG2Q9BU76 263 aaKnown RBP3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 BHMT2Q9H2M3 363 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 CLSTN2Q9H4D0 955 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 ATP6V0A4Q9HBG4 840 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 DACH1Q9UI36 760 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 ODF2LQ9ULJ1 636 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 MYH15Q9Y2K3 1946 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 DOCK3Q8IZD9 2030 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 NRCAMQ92823 1304 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 PVALEFA0A1B0GWK0 134 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 DNM1LO00429 736 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 NR1I2O75469 434 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 F2P00734 622 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 GJB1P08034 283 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 SPATA31C1P0DKV0 1188 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 GAP43P17677 238 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 LIG1P18858 919 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 SMTNP53814 917 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 ASIC1P78348 528 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 PTPN11Q06124 597 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 PPFIA1Q13136 1202 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 STIM1Q13586 685 aa3.93□□□□□ -1.78
ATP2B1-203ENST00000393164 DHX8Q14562 1220 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms