RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 SLC26A4O43511 780 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 NOL4O94818 638 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 FAM13AO94988 1023 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 TNNT3P45378 269 aaPredicted RBP23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 RPS6P62753 249 aaKnown RBP23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 MRPS9P82933 396 aaKnown RBP23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 ARID5AQ03989 594 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 PLS1Q14651 629 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 EPM2AIP1Q7L775 607 aaPredicted RBP23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 JAKMIP2Q96AA8 810 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 CEP63Q96MT8 703 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 WRNIP1Q96S55 665 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 TEKT3Q9BXF9 490 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 TUFT1Q9NNX1 390 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 SAMM50Q9Y512 469 aa23.4■■□□□ 1.34
SPTBN4-203ENST00000392023 RPS12P25398 132 aaKnown RBP23.39■■□□□ 1.34
SPTBN4-203ENST00000392023 POLR2FP61218 127 aaKnown RBP23.39■■□□□ 1.34
SPTBN4-203ENST00000392023 KCNH2Q12809 1159 aa23.39■■□□□ 1.34
SPTBN4-203ENST00000392023 NSMFQ6X4W1 530 aa23.39■■□□□ 1.34
SPTBN4-203ENST00000392023 ATG4CQ96DT6 458 aa23.39■■□□□ 1.34
SPTBN4-203ENST00000392023 NAPGQ99747 312 aaPredicted RBP23.39■■□□□ 1.34
SPTBN4-203ENST00000392023 ZNF446Q9NWS9 450 aa23.39■■□□□ 1.34
SPTBN4-203ENST00000392023 CTDP1Q9Y5B0 961 aaPredicted RBP23.39■■□□□ 1.34
SPTBN4-203ENST00000392023 FZD9O00144 591 aa23.39■■□□□ 1.33
SPTBN4-203ENST00000392023 AKAP3O75969 853 aa23.39■■□□□ 1.33
SPTBN4-203ENST00000392023 ACTN1P12814 892 aa23.39■■□□□ 1.33
SPTBN4-203ENST00000392023 COG2Q14746 738 aa23.39■■□□□ 1.33
SPTBN4-203ENST00000392023 TRPM4Q8TD43 1214 aa23.39■■□□□ 1.33
SPTBN4-203ENST00000392023 SYTL5Q8TDW5 730 aaPredicted RBP23.39■■□□□ 1.33
SPTBN4-203ENST00000392023 LPAR1Q92633 364 aa23.39■■□□□ 1.33
SPTBN4-203ENST00000392023 DEF6Q9H4E7 631 aa23.39■■□□□ 1.33
SPTBN4-203ENST00000392023 BRCA1P38398 1863 aaKnown RBP23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 TMEM150BA6NC51 233 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 NOP2P46087 812 aaKnown RBP23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 KRT83P78385 493 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 DCAF17Q5H9S7 520 aaPredicted RBP23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 ZBTB9Q96C00 473 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 HAUS4Q9H6D7 363 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 RSPH14Q9UHP6 348 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 CDC23Q9UJX2 597 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 PCDHB13Q9Y5F0 798 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 EIF3CLB5ME19 914 aaKnown RBP23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 SRGAP2O75044 1071 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 IPO7O95373 1038 aaKnown RBP23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 EPS15P42566 896 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 CLCN6P51797 869 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 ITGB3BPQ13352 177 aaPredicted RBP23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 TCERG1LQ5VWI1 586 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 EIF3CQ99613 913 aaKnown RBP23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 PPP1R9AQ9ULJ8 1098 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 STK24Q9Y6E0 443 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 ZHX2Q9Y6X8 837 aa23.38■■□□□ 1.33
SPTBN4-203ENST00000392023 ASTN1O14525 1302 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 HMGCS2P54868 508 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 CCDC170Q8IYT3 715 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 RASSF4Q9H2L5 321 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 KIF11P52732 1056 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 GFPT1Q06210 699 aaPredicted RBP23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 BMS1Q14692 1282 aaKnown RBP23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 EDRF1Q3B7T1 1238 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 TKFCQ3LXA3 575 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 ANKRD13CQ8N6S4 541 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 TRAF3IP3Q9Y228 551 aa23.37■■□□□ 1.33
SPTBN4-203ENST00000392023 AKR1B10O60218 316 aa23.36■■□□□ 1.33
SPTBN4-203ENST00000392023 ATP1A1P05023 1023 aaKnown RBP23.36■■□□□ 1.33
SPTBN4-203ENST00000392023 H2AFXP16104 143 aaPredicted RBP23.36■■□□□ 1.33
SPTBN4-203ENST00000392023 SLC9A1P19634 815 aa23.36■■□□□ 1.33
SPTBN4-203ENST00000392023 SETQ01105 290 aaPredicted RBP23.36■■□□□ 1.33
SPTBN4-203ENST00000392023 MIER3Q7Z3K6 550 aa23.36■■□□□ 1.33
SPTBN4-203ENST00000392023 NACC1Q96RE7 527 aa23.36■■□□□ 1.33
SPTBN4-203ENST00000392023 DHX15O43143 795 aaKnown RBP23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 TGFB1I1O43294 461 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 ATP9AO75110 1047 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 GNA14O95837 355 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 NR3C1P04150 777 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 EPHA7Q15375 998 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 SPA17Q15506 151 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 TDRD12Q587J7 1177 aaKnown RBP23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 PDXDC1Q6P996 788 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 FOXR2Q6PJQ5 311 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 RNF216Q9NWF9 866 aaPredicted RBP23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 ARMCX3Q9UH62 379 aaPredicted RBP23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 PCNTO95613 3336 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 TLR2O60603 784 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 CHMP4BP1P59074 171 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 B3GNT9Q6UX72 402 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 RSRC2Q7L4I2 434 aaKnown RBP23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 PARVGQ9HBI0 331 aa23.35■■□□□ 1.33
SPTBN4-203ENST00000392023 VWA5AO00534 786 aa23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 KRT86O43790 486 aa23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 SEC31AO94979 1220 aaKnown RBP23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 HNRNPH3P31942 346 aaKnown RBP23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 BACE1P56817 501 aa23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 MTMR1Q13613 665 aa23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 MCF2L2Q86YR7 1114 aa23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 RMDN3Q96TC7 470 aa23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 IFIH1Q9BYX4 1025 aaKnown RBP23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 PCDHA13Q9Y5I0 950 aa23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 PDXKO00764 312 aa23.34■■□□□ 1.33
SPTBN4-203ENST00000392023 CALUO43852 315 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms