RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 KCNJ6P48051 423 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 ZNF484Q5JVG2 852 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 FAM26DQ5JW98 314 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 SWSAP1Q6NVH7 229 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 DEFB123Q8N688 67 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 ETNPPLQ8TBG4 499 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 OXER1Q8TDS5 423 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 BBXQ8WY36 941 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-203ENST00000391855 TNFRSF25Q93038 417 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 FAM20AQ96MK3 541 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 DISC1Q9NRI5 854 aa14.31□□□□□ -0.12
GGPS1-203ENST00000391855 CXXC1Q9P0U4 656 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-203ENST00000391855 CCNT1O60563 726 aaKnown RBP14.3□□□□□ -0.12
GGPS1-203ENST00000391855 DNAJB2P25686 324 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 IGBP1P78318 339 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 NR5A1Q13285 461 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 GPNMBQ14956 572 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 B3GNT9Q6UX72 402 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 CKAP2LQ8IYA6 745 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
GGPS1-203ENST00000391855 APBB2Q92870 758 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 KCNMB3Q9NPA1 279 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 MSRAQ9UJ68 235 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 PCDHA2Q9Y5H9 948 aa14.3□□□□□ -0.12
GGPS1-203ENST00000391855 SMIM35A0A1B0GVV1 85 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 M0QZ92 97 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 CTSHP09668 335 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 ATP2A2P16615 1042 aaKnown RBP14.29□□□□□ -0.12
GGPS1-203ENST00000391855 IKBKEQ14164 716 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 MARCH8Q5T0T0 291 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 FAM43BQ6ZT52 329 aaPredicted RBP14.29□□□□□ -0.12
GGPS1-203ENST00000391855 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 SLFN12Q8IYM2 578 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 SEPT8Q92599 483 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 TIFAQ96CG3 184 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 UNC45AQ9H3U1 944 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 GABBR1Q9UBS5 961 aa14.29□□□□□ -0.12
GGPS1-203ENST00000391855 BTBD18B2RXH4 712 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 CHMP2AO43633 222 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 SLC37A4O43826 429 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 MARCH6O60337 910 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 DKC1O60832 514 aaKnown RBP eCLIP14.28□□□□□ -0.12
GGPS1-203ENST00000391855 DTNBO60941 627 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
GGPS1-203ENST00000391855 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 ORC2Q13416 577 aaPredicted RBP14.28□□□□□ -0.12
GGPS1-203ENST00000391855 MBTPS1Q14703 1052 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 IER5Q5VY09 327 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 RUFY4Q6ZNE9 571 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 NME8Q8N427 588 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 FBXO18Q8NFZ0 1043 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 UIMC1Q96RL1 719 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 PBX4Q9BYU1 374 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 BACH2Q9BYV9 841 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 FOXP1Q9H334 677 aaPredicted RBP14.28□□□□□ -0.12
GGPS1-203ENST00000391855 NRBP2Q9NSY0 501 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 MTMR10Q9NXD2 777 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 PCDHA11Q9Y5I1 949 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 SQORQ9Y6N5 450 aa14.28□□□□□ -0.12
GGPS1-203ENST00000391855 MYH9P35579 1960 aaKnown RBP14.28□□□□□ -0.12
GGPS1-203ENST00000391855 KIF28PB7ZC32 967 aa14.27□□□□□ -0.12
GGPS1-203ENST00000391855 OATP04181 439 aa14.27□□□□□ -0.12
GGPS1-203ENST00000391855 FOSBP53539 338 aa14.27□□□□□ -0.12
GGPS1-203ENST00000391855 WDR5P61964 334 aaKnown RBP14.27□□□□□ -0.12
GGPS1-203ENST00000391855 MRPS6P82932 125 aaKnown RBP14.27□□□□□ -0.12
GGPS1-203ENST00000391855 MGAT3Q09327 533 aa14.27□□□□□ -0.12
GGPS1-203ENST00000391855 EARS2Q5JPH6 523 aaKnown RBP14.27□□□□□ -0.12
GGPS1-203ENST00000391855 MTHFD1LQ6UB35 978 aa14.27□□□□□ -0.12
GGPS1-203ENST00000391855 USP38Q8NB14 1042 aa14.27□□□□□ -0.12
GGPS1-203ENST00000391855 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.12
GGPS1-203ENST00000391855 TMX3Q96JJ7 454 aa14.27□□□□□ -0.12
GGPS1-203ENST00000391855 FAM49AQ9H0Q0 323 aaPredicted RBP14.27□□□□□ -0.12
GGPS1-203ENST00000391855 KDM3AQ9Y4C1 1321 aa14.27□□□□□ -0.13
GGPS1-203ENST00000391855 TET1Q8NFU7 2136 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 MAGEB2O15479 319 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 ATP4AP20648 1035 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 PRKCEQ02156 737 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 Q7L0L9 218 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 HERC6Q8IVU3 1022 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 ZNF710Q8N1W2 664 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 DBF4BQ8NFT6 615 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 TRAPPC12Q8WVT3 735 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 VAV3Q9UKW4 847 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 TRPV2Q9Y5S1 764 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 CDY2AQ9Y6F7 541 aa14.26□□□□□ -0.13
GGPS1-203ENST00000391855 FAM205CA6NFA0 338 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 GRXCR1A8MXD5 290 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 NEMFO60524 1076 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 CHRNA1P02708 482 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 AMHP03971 560 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 KLRC1P26715 233 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 TRAPPC10P48553 1259 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 GUCY1B3Q02153 619 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 GNL2Q13823 731 aaKnown RBP14.25□□□□□ -0.13
GGPS1-203ENST00000391855 XKR3Q5GH77 459 aa14.25□□□□□ -0.13
GGPS1-203ENST00000391855 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
GGPS1-203ENST00000391855 SEMA6BQ9H3T3 888 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms