RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 CATSPEREQ5SY80 951 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 CREB3L3Q68CJ9 461 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 DPP8Q6V1X1 898 aaPredicted RBP4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 STPG3Q8N7X2 389 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 WDR48Q8TAF3 677 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 ADAMTS17Q8TE56 1095 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 CHAC2Q8WUX2 184 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 ERCC4Q92889 916 aaPredicted RBP4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 TACO1Q9BSH4 297 aaKnown RBP4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 CAAP1Q9H8G2 361 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 LUC7LQ9NQ29 371 aaKnown RBP4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 OXSMQ9NWU1 459 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 THG1LQ9NWX6 298 aaKnown RBP4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 UCKL1Q9NWZ5 548 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 BTBD7Q9P203 1132 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 FTSJ1Q9UET6 329 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 PRKAB1Q9Y478 270 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 PRAMEF22A3QJZ6 481 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 TRIM13O60858 407 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 SASH1O94885 1247 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 CYP1A1P04798 512 aaPredicted RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 CYP17A1P05093 508 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 SLC9A1P19634 815 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 IL13P35225 146 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 STAT3P40763 770 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 KPNA1P52294 538 aaPredicted RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 MLLT6P55198 1093 aaPredicted RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 GJA9P57773 515 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 OCRLQ01968 901 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 FZD5Q13467 585 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 CT47A1Q5JQC4 288 aaPredicted RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 FAM26FQ5R3K3 315 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 DDX46Q7L014 1031 aaKnown RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 RNF180Q86T96 592 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 PASD1Q8IV76 773 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 EFHBQ8N7U6 833 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 MARCH10Q8NA82 808 aaPredicted RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 CHTF18Q8WVB6 975 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 ZCCHC14Q8WYQ9 949 aaKnown RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 E2F7Q96AV8 911 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 GPR101Q96P66 508 aaPredicted RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 TMX1Q9H3N1 280 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 ZCCHC4Q9H5U6 513 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 TOMM22Q9NS69 142 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 KCND1Q9NSA2 647 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 GALNT8Q9NY28 637 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 H2AFY2Q9P0M6 372 aaPredicted RBP4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 SPO11Q9Y5K1 396 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 CADPSQ9ULU8 1353 aa4.37□□□□□ -1.71
RNU6-550P-201ENST00000391057 H0Y858 1186 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 GOLGA6L22H0YM25 854 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 MPIG6BO95866 241 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 IL18BPO95998 194 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 KNG1P01042 644 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 COL6A1P12109 1028 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 CNGA1P29973 690 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 ECE1P42892 770 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 LSSP48449 732 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 DHCR24Q15392 516 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 RGL3Q3MIN7 710 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 RNF187Q5TA31 235 aaPredicted RBP4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 NT5DC1Q5TFE4 455 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 MCTP2Q6DN12 878 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 C11orf74Q86VG3 221 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 ZNF761Q86XN6 746 aaPredicted RBP4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 TXNDC5Q8NBS9 432 aaKnown RBP4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 SMC1BQ8NDV3 1235 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 CALML6Q8TD86 181 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 USP7Q93009 1102 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 YTHDC1Q96MU7 727 aaKnown RBP4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 ELF4Q99607 663 aaPredicted RBP4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 BTBD2Q9BX70 525 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 TMEM168Q9H0V1 697 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 USP40Q9NVE5 1235 aa4.36□□□□□ -1.71
RNU6-550P-201ENST00000391057 UBA6A0AVT1 1052 aaPredicted RBP4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 FKBP9O95302 570 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 PTX3P26022 381 aaPredicted RBP4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 IL13RA1P78552 427 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 ALDH6A1Q02252 535 aaKnown RBP4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 ADCY1Q08828 1119 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 EPHA7Q15375 998 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 WDR72Q3MJ13 1102 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 LRSAM1Q6UWE0 723 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 SPOCD1Q6ZMY3 1216 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 FKBP9P1Q75LS8 142 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 CXXC5Q7LFL8 322 aaKnown RBP4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 KRT26Q7Z3Y9 468 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 RTN4RL1Q86UN2 441 aaPredicted RBP4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 NME9Q86XW9 330 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 ZZZ3Q8IYH5 903 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 UBR7Q8N806 425 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 SYT8Q8NBV8 401 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 SCYL1Q96KG9 808 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 KCNC2Q96PR1 638 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 FOXB1Q99853 325 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 AMNQ9BXJ7 453 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 OR10A5Q9H207 317 aa4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU6-550P-201ENST00000391057 MROH6A6NGR9 719 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 C9orf118A6NHY6 69 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms