RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 CDC42EP3Q9UKI2 254 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 SH3BP1Q9Y3L3 701 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 HMGCRP04035 888 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 CAPNS1P04632 268 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 ADCY8P40145 1251 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 EPHA5P54756 1037 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 DBPQ10586 325 aaPredicted RBP2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 TOB2Q14106 344 aaPredicted RBP2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 NCAPHQ15003 741 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 EIF4HQ15056 248 aaKnown RBP2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 WDR72Q3MJ13 1102 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 SV2CQ496J9 727 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 HABP4Q5JVS0 413 aaKnown RBP2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 SYCE2Q6PIF2 218 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 DPP8Q6V1X1 898 aaPredicted RBP2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 SHCBP1Q8NEM2 672 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 OR14K1Q8NGZ2 314 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 GIPC2Q8TF65 315 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 KCNJ15Q99712 375 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 PACSIN3Q9UKS6 424 aa2.77□□□□□ -1.97
RNU6-239P-201ENST00000390990 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 ZAR1LA6NP61 321 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 CYP27B1O15528 508 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 SLC26A4O43511 780 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 RHOBTB3O94955 611 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 ERCC3P19447 782 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 GRIA2P42262 883 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 MRE11P49959 708 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 IL13RA1P78552 427 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 TRIM68Q6AZZ1 485 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 RHOUQ7L0Q8 258 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 FILIP1Q7Z7B0 1213 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 ADGRG3Q86Y34 549 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 HAS1Q92839 578 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 MLST8Q9BVC4 326 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 BCL2L13Q9BXK5 485 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 CD244Q9BZW8 370 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 OR10A2Q9H208 303 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 SYNPO2LQ9H987 977 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 GPR27Q9NS67 375 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 LRP2BPQ9P2M1 347 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 DSEQ9UL01 958 aa2.76□□□□□ -1.97
RNU6-239P-201ENST00000390990 A0A0A6YYK5 440 aaPredicted RBP2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 FAM20BO75063 409 aa2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 GNAT1P11488 350 aa2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 SPIRE1Q08AE8 756 aa2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 SAFB2Q14151 953 aaKnown RBP eCLIP2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 ZNF326Q5BKZ1 582 aaKnown RBP2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 EPHA10Q5JZY3 1008 aa2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 KCTD1Q719H9 257 aa2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 MPHOSPH9Q99550 1183 aa2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 BACH2Q9BYV9 841 aa2.75□□□□□ -1.97
RNU6-239P-201ENST00000390990 COL4A3Q01955 1670 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 TCRBV5S4A2TA0A5A2 114 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 PMS2P1A4D2B8 440 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 GRID2IPA4D2P6 1211 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 FAM90A27PA6NNH2 459 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 GRK2P25098 689 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 CD38P28907 300 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 PTGS2P35354 604 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 GRK3P35626 688 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 NASPP49321 788 aaPredicted RBP2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 CLK3P49761 638 aaKnown RBP2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 RIN1Q13671 783 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 CNGB1Q14028 1251 aaPredicted RBP2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 C6orf15Q6UXA7 325 aaPredicted RBP2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 RASGRP4Q8TDF6 673 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 SH3RF2Q8TEC5 729 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 SLC25A43Q8WUT9 341 aaPredicted RBP2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 CPLX3Q8WVH0 158 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 LENG9Q96B70 501 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 SPATA32Q96LK8 384 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 PHF20Q9BVI0 1012 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 METTL5Q9NRN9 209 aaKnown RBP2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 NUB1Q9Y5A7 615 aa2.74□□□□□ -1.97
RNU6-239P-201ENST00000390990 XDHP47989 1333 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 B2RBV5 119 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 TRAF5O00463 557 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 KIAA0355O15063 1070 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 NR4A1P22736 598 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 STAT3P40763 770 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 MAN2A2P49641 1150 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 CD83Q01151 205 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 ACAP1Q15027 740 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 STILQ15468 1287 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 ZNF362Q5T0B9 420 aaPredicted RBP2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 BTBD8Q5XKL5 378 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 OLFML1Q6UWY5 402 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 LBX2Q6XYB7 198 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 CXXC5Q7LFL8 322 aaKnown RBP2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 OTOP2Q7RTS6 562 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 ANKRD35Q8N283 1001 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 MIEF2Q96C03 454 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 GPRASP2Q96D09 838 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 WNK4Q96J92 1243 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 PRDM13Q9H4Q3 707 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 INCENPQ9NQS7 918 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 GALNT8Q9NY28 637 aa2.73□□□□□ -1.97
RNU6-239P-201ENST00000390990 ARHGAP28Q9P2N2 729 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms