RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 NBR1Q14596 966 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 TMEM266Q2M3C6 531 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 ZNF484Q5JVG2 852 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 TAF2Q6P1X5 1199 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 WNT8AQ9H1J5 351 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 NRBP2Q9NSY0 501 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 PCDHB6Q9Y5E3 794 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 MBLAC1A4D2B0 266 aaPredicted RBP16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 STX6O43752 255 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 ZNF862O60290 1169 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 PARNO95453 639 aaKnown RBP16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 P4HBP07237 508 aaKnown RBP16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 CKBP12277 381 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 SELPP16109 830 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 RFC2P35250 354 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 QARSP47897 775 aaKnown RBP16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 BECN1Q14457 450 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 UGCGQ16739 394 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 LRRC8DQ7L1W4 858 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 NEK9Q8TD19 979 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 PRO3102Q9H379 93 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 COLQQ9Y215 455 aaPredicted RBP16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 TRIP12Q14669 1992 aaPredicted RBP16.89■□□□□ 0.29
IGHV3-53-201ENST00000390627 TANC1Q9C0D5 1861 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 A0A1W2PPC1 479 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 IQCF3P0C7M6 154 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 CSF2RAP15509 400 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 THPOP40225 353 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 PTGDRQ13258 359 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 TRIM71Q2Q1W2 868 aaKnown RBP16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 XKR3Q5GH77 459 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 MARCH8Q5T0T0 291 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 TRMT1LQ7Z2T5 733 aaKnown RBP16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 RSPH3Q86UC2 560 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 WNT8BQ93098 351 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 SCLYQ96I15 445 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 RAB34Q9BZG1 259 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 WDR81Q562E7 1941 aa16.88■□□□□ 0.29
IGHV3-53-201ENST00000390627 BMP15O95972 392 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 PFKMP08237 780 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 PRPHP41219 470 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 TECP42680 631 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 PSRC1Q6PGN9 363 aaPredicted RBP16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 RPAINQ86UA6 219 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 C4orf32Q8N8J7 132 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 TRAPPC12Q8WVT3 735 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 EIF2AK1Q9BQI3 630 aaKnown RBP16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 LXNQ9BS40 222 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 IL23AQ9NPF7 189 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 SEPT9Q9UHD8 586 aaPredicted RBP16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 PCDHA2Q9Y5H9 948 aa16.87■□□□□ 0.29
IGHV3-53-201ENST00000390627 POTEMA6NI47 508 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 MAGEB2O15479 319 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 KLRC1P26715 233 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 FXR2P51116 673 aaKnown RBP eCLIP16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 ATP2C1P98194 919 aaPredicted RBP16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 RESTQ13127 1097 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 ZNF618Q5T7W0 954 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 MTHFD1LQ6UB35 978 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 RUFY4Q6ZNE9 571 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 C4orf19Q8IY42 314 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 TDHQ8IZJ6 230 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 ERMNQ8TAM6 284 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 DYDC2Q96IM9 177 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 ZSWIM4Q9H7M6 989 aa16.86■□□□□ 0.29
IGHV3-53-201ENST00000390627 SMIM35A0A1B0GVV1 85 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 RSPH10B2B2RC85 870 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 ZBTB42B2RXF5 422 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 RSPH10BP0C881 870 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 CYP4A11Q02928 519 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 HAUS3Q68CZ6 603 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 DNAJB3Q8WWF6 145 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 NIFKQ9BYG3 293 aaKnown RBP16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 FAM49AQ9H0Q0 323 aaPredicted RBP16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 RGL1Q9NZL6 768 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 STK24Q9Y6E0 443 aa16.85■□□□□ 0.29
IGHV3-53-201ENST00000390627 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 M0QZ92 97 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 STBD1O95210 358 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 C22orf31O95567 290 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 CTSHP09668 335 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 EPHB4P54760 987 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 TBC1D8BQ0IIM8 1120 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 CTTNQ14247 550 aaKnown RBP16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 MTERF2Q49AM1 385 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 ARL6IP4Q66PJ3 421 aaKnown RBP16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 TRAF7Q6Q0C0 670 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 DTHD1Q6ZMT9 781 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 OTUD6AQ7L8S5 288 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 DEFB128Q7Z7B8 93 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 TPH2Q8IWU9 490 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 ZBTB10Q96DT7 871 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 HSD17B14Q9BPX1 270 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms