RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 PSMA4P25789 261 aaKnown RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 HOXA11P31270 313 aaPredicted RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 S100A5P33763 92 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 RDXP35241 583 aaKnown RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 HOXD13P35453 343 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 MATR3P43243 847 aaKnown RBP eCLIP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 MSH2P43246 934 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 IFNAR2P48551 515 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 POLD2P49005 469 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 GSK3AP49840 483 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 SULT1E1P49888 294 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 USP11P51784 963 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 YARSP54577 528 aaKnown RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 NR1H2P55055 460 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 SLC26A5P58743 744 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 CENPCQ03188 943 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ICA1Q05084 483 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TFCP2Q12800 502 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 USP4Q13107 963 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 SMAD4Q13485 552 aaKnown RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 AUHQ13825 339 aaKnown RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 KCNB1Q14721 858 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC85BQ15834 202 aaPredicted RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ARL13BQ3SXY8 428 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 GNPTABQ3T906 1256 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC183Q5T5S1 534 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 FCRLBQ6BAA4 426 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 WDR73Q6P4I2 378 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 POTEBQ6S5H4 581 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 LMBR1LQ6UX01 489 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC84Q86UT8 332 aaPredicted RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 RETREG3Q86VR2 466 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 HEATR4Q86WZ0 1026 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 LSRQ86X29 649 aaPredicted RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 NOSTRINQ8IVI9 506 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 OR8H3Q8N146 312 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 NUP93Q8N1F7 819 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 KRT78Q8N1N4 520 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 CAMKK1Q8N5S9 505 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ANKRD53Q8N9V6 530 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 GOLM1Q8NBJ4 401 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 FAM156AQ8NDB6 213 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 AGBL5Q8NDL9 886 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 DENND6BQ8NEG7 585 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 OR6C4Q8NGE1 309 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TTLL11Q8NHH1 800 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 MOSPD2Q8NHP6 518 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ACMSDQ8TDX5 336 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 UCMAQ8WVF2 138 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TRAPPC12Q8WVT3 735 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TEKT4Q8WW24 435 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 SGCDQ92629 289 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ARL8AQ96BM9 186 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 LRRC45Q96CN5 670 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 SLC10A4Q96EP9 437 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 VPS39Q96JC1 886 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 FERD3LQ96RJ6 166 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 DDX23Q9BUQ8 820 aaKnown RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TMEM106CQ9BVX2 250 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 BCO2Q9BYV7 579 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 RNF38Q9H0F5 515 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 OR10A4Q9H209 315 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 JMJD4Q9H9V9 463 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 SENP2Q9HC62 589 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ATP13A1Q9HD20 1204 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 USP40Q9NVE5 1235 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 DDX18Q9NVP1 670 aaKnown RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TBCCD1Q9NVR7 557 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 MARK1Q9P0L2 795 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 CALCOCO1Q9P1Z2 691 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TBC1D14Q9P2M4 693 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ORC3Q9UBD5 711 aaPredicted RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TBC1D29Q9UFV1 150 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ADGRE2Q9UHX3 823 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 CDC23Q9UJX2 597 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 AGO2Q9UKV8 859 aaKnown RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 RIMKLBQ9ULI2 386 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ZNRF3Q9ULT6 936 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 POLHQ9Y253 713 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 ATP11BQ9Y2G3 1177 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 TMED5Q9Y3A6 229 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 PCDHB12Q9Y5F1 795 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 PCDHGB5Q9Y5G0 923 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 SNX8Q9Y5X2 465 aa3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 V9GYY5 206 aaPredicted RBP3.75□□□□□ -1.81
TRAJ17-201ENST00000390520 PASKQ96RG2 1323 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 A0A0G2JPF8 293 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 A0A1W2PRU2 124 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 LCHNA4D1U4 455 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 HNRNPCL3B7ZW38 293 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 UBAP1LF5GYI3 381 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 ASAP2O43150 1006 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 TXNL1O43396 289 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 AP1G1O43747 822 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 SOAT2O75908 522 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 YEATS4O95619 227 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 MT-CO1P00395 513 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 PF4P02776 101 aa3.74□□□□□ -1.81
TRAJ17-201ENST00000390520 CSTBP04080 98 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms