RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PPFIA4O75335 1185 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ESRRBO95718 433 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CTSBP07858 339 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZCCHC18P0CG32 403 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CGB7P0DN87 165 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ARID4AP29374 1257 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 KIR2DS4P43632 304 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SCNN1GP51170 649 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SOX8P57073 446 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 RBM6P78332 1123 aaKnown RBP-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ATP11AP98196 1134 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 LAPTM5Q13571 262 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 HABP2Q14520 560 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ESCO1Q5FWF5 840 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 PXDC1Q5TGL8 231 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CEP135Q66GS9 1140 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZCCHC12Q6PEW1 402 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 LVRNQ6Q4G3 990 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 TAS1R1Q7RTX1 841 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CCDC125Q86Z20 511 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ERC1Q8IUD2 1116 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 GJD3Q8N144 294 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ANKRD52Q8NB46 1076 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZNF280CQ8ND82 737 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 TRIM58Q8NG06 486 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 PJA1Q8NG27 643 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SLC7A3Q8WY07 619 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZNF689Q96CS4 500 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 HSH2DQ96JZ2 352 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZNF599Q96NL3 588 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZNF670Q9BS34 389 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 WDR11Q9BZH6 1224 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 PRDM5Q9NQX1 630 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 PCOLCE2Q9UKZ9 415 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 AP4E1Q9UPM8 1137 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 NOD1Q9Y239 953 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SAMHD1Q9Y3Z3 626 aaKnown RBP-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZHX2Q9Y6X8 837 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 BIRC6Q9NR09 4857 aa-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.46□□□□□ -2.64
RNU6-1340P-201ENST00000384438 PTCH1Q13635 1447 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 IGLV3-10A0A075B6K4 115 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ARID3CA6NKF2 412 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 NFKBIEO00221 500 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 FAM20BO75063 409 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 TCEA3O75764 348 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 IGKV3-15P01624 115 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 FGAP02671 866 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CD1AP06126 327 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CD48P09326 243 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 FDX1P10109 184 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 RARAP10276 462 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 COL6A2P12110 1019 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 GATA1P15976 413 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 MGMTP16455 207 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 GATA2P23769 480 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 PCSK6P29122 969 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 NOS2P35228 1153 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 KIR2DL1P43626 348 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 KIR2DL2P43627 348 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 MMP13P45452 471 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZFP36L2P47974 494 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ARL4DP49703 201 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ERVFC1-1P60608 527 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ERVK-21P61565 698 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CACNB2Q08289 660 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 RFTN1Q14699 578 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SUPT20HL1Q3ZLR7 823 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 RNF212Q495C1 297 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 PLEKHG4Q58EX7 1191 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 TTLL5Q6EMB2 1281 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZNF549Q6P9A3 640 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 LINC00336Q6ZUF6 198 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZNF438Q7Z4V0 828 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 YTHDF3Q7Z739 585 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 RSPH3Q86UC2 560 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 LMO3Q8TAP4 145 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 MPLKIPQ8TAP9 179 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ADAM32Q8TC27 787 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZDHHC1Q8WTX9 485 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 NUDCD2Q8WVJ2 157 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 NSUN5Q96P11 429 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 INPP4AQ96PE3 977 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SPAG8Q99932 426 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 NABP2Q9BQ15 211 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SYT3Q9BQG1 590 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CDK19Q9BWU1 502 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 DUSP15Q9H1R2 295 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 IL21RQ9HBE5 538 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ETNK1Q9HBU6 452 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SCRT2Q9NQ03 307 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CEP126Q9P2H0 1117 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZNF223Q9UK11 482 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ADAMTS5Q9UNA0 930 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 GPSM3Q9Y4H4 160 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SEC16AO15027 2179 aa-1.47□□□□□ -2.64
RNU6-1340P-201ENST00000384438 FRMPD2Q68DX3 1309 aaPredicted RBP-1.47□□□□□ -2.65
RNU6-1340P-201ENST00000384438 PIEZO1Q92508 2521 aa-1.47□□□□□ -2.65
RNU6-1340P-201ENST00000384438 SPDYE5A6NIY4 337 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms