RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 TRAPPC12Q8WVT3 735 aa30.07■■■□□ 2.4
NPHP3-202ENST00000383282 ZNF689Q96CS4 500 aaPredicted RBP30.07■■■□□ 2.4
NPHP3-202ENST00000383282 PABPC5Q96DU9 382 aaKnown RBP30.07■■■□□ 2.4
NPHP3-202ENST00000383282 FAM217BQ9NTX9 383 aaPredicted RBP30.07■■■□□ 2.4
NPHP3-202ENST00000383282 RAPGEFL1Q9UHV5 662 aa30.07■■■□□ 2.4
NPHP3-202ENST00000383282 SMIM35A0A1B0GVV1 85 aa30.06■■■□□ 2.4
NPHP3-202ENST00000383282 DDX39AO00148 427 aaKnown RBP30.06■■■□□ 2.4
NPHP3-202ENST00000383282 TMEM62Q0P6H9 643 aa30.06■■■□□ 2.4
NPHP3-202ENST00000383282 PAK2Q13177 524 aa30.06■■■□□ 2.4
NPHP3-202ENST00000383282 PFKFB3Q16875 520 aaPredicted RBP30.06■■■□□ 2.4
NPHP3-202ENST00000383282 PLA2G4DQ86XP0 818 aa30.06■■■□□ 2.4
NPHP3-202ENST00000383282 CCDC12Q8WUD4 166 aaPredicted RBP30.06■■■□□ 2.4
NPHP3-202ENST00000383282 CLP1Q92989 425 aaKnown RBP30.06■■■□□ 2.4
NPHP3-202ENST00000383282 CELF4Q9BZC1 486 aaKnown RBP30.06■■■□□ 2.4
NPHP3-202ENST00000383282 NCK2O43639 380 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 HBP1O60381 514 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 DGKIO75912 1065 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 STAG3L1P0CL83 205 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 IL9P15248 144 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 JAKMIP3Q5VZ66 844 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 MTHFD1LQ6UB35 978 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 FAM178BQ8IXR5 827 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 FAM50BQ9Y247 325 aa30.05■■■□□ 2.4
NPHP3-202ENST00000383282 RALGAPA2Q2PPJ7 1873 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 IGSF9BQ9UPX0 1349 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 IGKV6D-21A0A0A0MT36 114 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 H3BQ06 376 aaPredicted RBP30.04■■■□□ 2.4
NPHP3-202ENST00000383282 LINC00271P0C7V0 271 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 SCG2P13521 617 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 ADD1P35611 737 aaKnown RBP30.04■■■□□ 2.4
NPHP3-202ENST00000383282 KRT76Q01546 638 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 TMEM31Q5JXX7 168 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 MCTP2Q6DN12 878 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 NPAS4Q8IUM7 802 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 LINC01599Q8WXQ3 324 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 PLVAPQ9BX97 442 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 PADI3Q9ULW8 664 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 NLRC5Q86WI3 1866 aa30.04■■■□□ 2.4
NPHP3-202ENST00000383282 KDM3AQ9Y4C1 1321 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 GRXCR2A6NFK2 248 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 MIS18BP1Q6P0N0 1132 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 ABHD15Q6UXT9 468 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 Q6ZUG5 572 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 GJD3Q8N144 294 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 C6orf50Q9HD87 102 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 ZNF302Q9NR11 478 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 CLDND1Q9NY35 253 aa30.03■■■□□ 2.4
NPHP3-202ENST00000383282 ESYT2A0FGR8 921 aa30.02■■■□□ 2.4
NPHP3-202ENST00000383282 CCNE2O96020 404 aa30.02■■■□□ 2.4
NPHP3-202ENST00000383282 KLRC1P26715 233 aa30.02■■■□□ 2.4
NPHP3-202ENST00000383282 SSTR3P32745 418 aaPredicted RBP30.02■■■□□ 2.4
NPHP3-202ENST00000383282 APOBRQ0VD83 1088 aa30.02■■■□□ 2.4
NPHP3-202ENST00000383282 CMTR2Q8IYT2 770 aaKnown RBP30.02■■■□□ 2.4
NPHP3-202ENST00000383282 ATP8B4Q8TF62 1192 aa30.02■■■□□ 2.4
NPHP3-202ENST00000383282 JAKMIP1Q96N16 626 aaKnown RBP30.02■■■□□ 2.4
NPHP3-202ENST00000383282 LRFN3Q9BTN0 628 aa30.02■■■□□ 2.4
NPHP3-202ENST00000383282 CD320Q9NPF0 282 aa30.02■■■□□ 2.4
NPHP3-202ENST00000383282 TCEAL9Q9UHQ7 104 aa30.02■■■□□ 2.4
NPHP3-202ENST00000383282 FAM86B1E9PN63 330 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 IPO5O00410 1097 aaKnown RBP30.01■■■□□ 2.39
NPHP3-202ENST00000383282 GRM6O15303 877 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 CYP3A4P08684 503 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 FAM86B2P0C5J1 330 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 SETQ01105 290 aaPredicted RBP30.01■■■□□ 2.39
NPHP3-202ENST00000383282 PDXDC2PQ6P474 469 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 BLOC1S2Q6QNY1 142 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 FAM43BQ6ZT52 329 aaPredicted RBP30.01■■■□□ 2.39
NPHP3-202ENST00000383282 RTN4RL1Q86UN2 441 aaPredicted RBP30.01■■■□□ 2.39
NPHP3-202ENST00000383282 BRF1Q92994 677 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 ZNF577Q9BSK1 485 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 ZMYND12Q9H0C1 365 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 LRFN2Q9ULH4 789 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 TTC3P53804 2025 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 COL1A2P08123 1366 aa30.01■■■□□ 2.39
NPHP3-202ENST00000383282 GNA11P29992 359 aa30■■■□□ 2.39
NPHP3-202ENST00000383282 AKAP17AQ02040 695 aaKnown RBP30■■■□□ 2.39
NPHP3-202ENST00000383282 COL19A1Q14993 1142 aa30■■■□□ 2.39
NPHP3-202ENST00000383282 ZNF484Q5JVG2 852 aa30■■■□□ 2.39
NPHP3-202ENST00000383282 ODR4Q5SWX8 454 aa30■■■□□ 2.39
NPHP3-202ENST00000383282 CCDC60Q8IWA6 550 aaPredicted RBP30■■■□□ 2.39
NPHP3-202ENST00000383282 REXO1Q8N1G1 1221 aaKnown RBP30■■■□□ 2.39
NPHP3-202ENST00000383282 KHSRPQ92945 711 aaKnown RBP eCLIP30■■■□□ 2.39
NPHP3-202ENST00000383282 TBC1D22BQ9NU19 505 aa30■■■□□ 2.39
NPHP3-202ENST00000383282 GINS2Q9Y248 185 aa30■■■□□ 2.39
NPHP3-202ENST00000383282 PI4K2BG5E9Z4 385 aa29.99■■■□□ 2.39
NPHP3-202ENST00000383282 MMP1P03956 469 aa29.99■■■□□ 2.39
NPHP3-202ENST00000383282 CPA1P15085 419 aa29.99■■■□□ 2.39
NPHP3-202ENST00000383282 NFX1Q12986 1120 aaKnown RBP29.99■■■□□ 2.39
NPHP3-202ENST00000383282 NAALADL2Q58DX5 795 aa29.99■■■□□ 2.39
NPHP3-202ENST00000383282 SWSAP1Q6NVH7 229 aa29.99■■■□□ 2.39
NPHP3-202ENST00000383282 CKAP2LQ8IYA6 745 aa29.99■■■□□ 2.39
NPHP3-202ENST00000383282 KCNB2Q92953 911 aa29.99■■■□□ 2.39
NPHP3-202ENST00000383282 P2RX5Q93086 422 aa29.99■■■□□ 2.39
NPHP3-202ENST00000383282 IGLV3-22A0A075B6J6 115 aa29.98■■■□□ 2.39
NPHP3-202ENST00000383282 CRYGNQ8WXF5 182 aa29.98■■■□□ 2.39
NPHP3-202ENST00000383282 RNF216Q9NWF9 866 aaPredicted RBP29.98■■■□□ 2.39
NPHP3-202ENST00000383282 HCN4Q9Y3Q4 1203 aa29.98■■■□□ 2.39
NPHP3-202ENST00000383282 MRPL42Q9Y6G3 142 aaKnown RBP29.98■■■□□ 2.39
NPHP3-202ENST00000383282 DHX15O43143 795 aaKnown RBP29.97■■■□□ 2.39
NPHP3-202ENST00000383282 PRPF3O43395 683 aaKnown RBP29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms