RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ZNF365Q70YC5 407 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 PLPPR4Q7Z2D5 763 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 C4orf32Q8N8J7 132 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 RDM1Q8NG50 284 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 PCDHA12Q9UN75 941 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 TRPC6Q9Y210 931 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 POTEMA6NI47 508 aa18.18■□□□□ 0.5
SNRPB-201ENST00000381342 ZSCAN22P10073 491 aaPredicted RBP18.18■□□□□ 0.5
SNRPB-201ENST00000381342 ATP4AP20648 1035 aa18.18■□□□□ 0.5
SNRPB-201ENST00000381342 ZNF200P98182 395 aaPredicted RBP18.18■□□□□ 0.5
SNRPB-201ENST00000381342 PRKCEQ02156 737 aa18.18■□□□□ 0.5
SNRPB-201ENST00000381342 TMEM240Q5SV17 173 aa18.18■□□□□ 0.5
SNRPB-201ENST00000381342 BANK1Q8NDB2 785 aa18.18■□□□□ 0.5
SNRPB-201ENST00000381342 CTAGE1Q96RT6 745 aa18.18■□□□□ 0.5
SNRPB-201ENST00000381342 FTOQ9C0B1 505 aaKnown RBP eCLIP18.18■□□□□ 0.52e-7■■□□□ 13.1
SNRPB-201ENST00000381342 SETD4Q9NVD3 440 aa18.18■□□□□ 0.5
SNRPB-201ENST00000381342 C17orf102A2RUQ5 167 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 ZNF862O60290 1169 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 ACTN1P12814 892 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 HOXC8P31273 242 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 RFC2P35250 354 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 SLC26A2P50443 739 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 PPFIA1Q13136 1202 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 Q7L0L9 218 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 TRMT1LQ7Z2T5 733 aaKnown RBP18.17■□□□□ 0.5
SNRPB-201ENST00000381342 CKAP2LQ8IYA6 745 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 LMBR1Q8WVP7 490 aa18.17■□□□□ 0.5
SNRPB-201ENST00000381342 MAFBQ9Y5Q3 323 aaPredicted RBP18.17■□□□□ 0.5
SNRPB-201ENST00000381342 POTEB3A0JP26 581 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 F13A1P00488 732 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 PFKMP08237 780 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 TECP42680 631 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 IGBP1P78318 339 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 ATP2C1P98194 919 aaPredicted RBP18.16■□□□□ 0.5
SNRPB-201ENST00000381342 GRIK4Q16099 956 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 POTEBQ6S5H4 581 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 CAGE1Q8TC20 777 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 ATP8B4Q8TF62 1192 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 TRAPPC12Q8WVT3 735 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 ATP6V0A1Q93050 837 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 SCLYQ96I15 445 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 ZSCAN16Q9H4T2 348 aaPredicted RBP18.16■□□□□ 0.5
SNRPB-201ENST00000381342 MTMR10Q9NXD2 777 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 UMODL1Q5DID0 1318 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 SIP14410 1827 aa18.16■□□□□ 0.5
SNRPB-201ENST00000381342 LAD1O00515 517 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 PITPNM1O00562 1244 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 OATP04181 439 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 INSRRP14616 1297 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 ANP32AP39687 249 aaKnown RBP18.15■□□□□ 0.5
SNRPB-201ENST00000381342 CYP4A11Q02928 519 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 EPHA7Q15375 998 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 SF3A1Q15459 793 aaKnown RBP18.15■□□□□ 0.5
SNRPB-201ENST00000381342 TMEM266Q2M3C6 531 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 HERVK_113Q902F9 699 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 DHX38Q92620 1227 aaKnown RBP18.15■□□□□ 0.5
SNRPB-201ENST00000381342 ZBTB10Q96DT7 871 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 DYDC2Q96IM9 177 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 FAM161BQ96MY7 647 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 RGL1Q9NZL6 768 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 WRAP73Q9P2S5 460 aaPredicted RBP18.15■□□□□ 0.5
SNRPB-201ENST00000381342 CLIC4Q9Y696 253 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 SCN5AQ14524 2016 aa18.15■□□□□ 0.5
SNRPB-201ENST00000381342 ZBBXA8MT70 800 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 TREHO43280 583 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 PARNO95453 639 aaKnown RBP18.14■□□□□ 0.49
SNRPB-201ENST00000381342 PRPHP41219 470 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 FXR2P51116 673 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNRPB-201ENST00000381342 ADAM17P78536 824 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 IL17AQ16552 155 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 C16orf59Q7L2K0 433 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 OTOP2Q7RTS6 562 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 DEFB128Q7Z7B8 93 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 WNT8BQ93098 351 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 FAM167AQ96KS9 214 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 EIF2AK1Q9BQI3 630 aaKnown RBP18.14■□□□□ 0.49
SNRPB-201ENST00000381342 LXNQ9BS40 222 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 WNT8AQ9H1J5 351 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 MSRAQ9UJ68 235 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 NRCAMQ92823 1304 aa18.14■□□□□ 0.49
SNRPB-201ENST00000381342 EVPLQ92817 2033 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 TMEM150BA6NC51 233 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 HBP1O60381 514 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 P4HBP07237 508 aaKnown RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 IQCF3P0C7M6 154 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 GNAT1P11488 350 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 PDIA4P13667 645 aaKnown RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 QARSP47897 775 aaKnown RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 PSMC5P62195 406 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 CEBPZQ03701 1054 aaKnown RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 CTTNQ14247 550 aaKnown RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 FOXD4L6Q3SYB3 417 aaPredicted RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 MARCH8Q5T0T0 291 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 FOXD4L3Q6VB84 417 aaPredicted RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 RUFY4Q6ZNE9 571 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 SERINC5Q86VE9 423 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 BBXQ8WY36 941 aaPredicted RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 SEPT9Q9UHD8 586 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms