RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 H0Y3Z8 333 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 HIP1RO75146 1068 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 SMIM24O75264 130 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 SUN1O94901 812 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 SLC9A1P19634 815 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 SLC8A3P57103 927 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 KCNH2Q12809 1159 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 ERMARDQ5T6L9 678 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 PARD3BQ8TEW8 1205 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 DCP1AQ9NPI6 582 aaPredicted RBP12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 TCP11X1B4DZS4 312 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 GFPT2O94808 682 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 NR2F2P24468 414 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 BYSLQ13895 437 aaKnown RBP12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 RCSD1Q6JBY9 416 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 LBHD1Q9BQE6 289 aaPredicted RBP12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 RIOK1Q9BRS2 568 aaKnown RBP12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 BATF3Q9NR55 127 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 THRAP3Q9Y2W1 955 aaKnown RBP12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
NPC1L1-202ENST00000381160 H0YGN5 161 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 GHRP10912 638 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 NQO1P15559 274 aaKnown RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 SESN3P58005 492 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 RBBP5Q15291 538 aaKnown RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 EXOC3L4Q17RC7 722 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 SUSD4Q5VX71 490 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 VSIG1Q86XK7 387 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 CCHCR1Q8TD31 782 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 EPS8L3Q8TE67 593 aaKnown RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 FBF1Q8TES7 1133 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 PPP1R12CQ9BZL4 782 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 SLIT3O75094 1523 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 EME2A4GXA9 379 aaPredicted RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 CFAP73A6NFT4 308 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 RASGRF2O14827 1237 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 PPIP5K2O43314 1243 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 AP1G2O75843 785 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 TDP2O95551 362 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 MXRA7P84157 204 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 COASYQ13057 564 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 ASTE1Q2TB18 679 aaPredicted RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 LACTB2Q53H82 288 aaPredicted RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 TAOK1Q7L7X3 1001 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 ZNF571Q7Z3V5 609 aaPredicted RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 ERICH1Q86X53 443 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 SYCE1Q8N0S2 351 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 CTNNBL1Q8WYA6 563 aaPredicted RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 ARPP21Q9UBL0 812 aaPredicted RBP12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 NPHP3-ACAD11A0A0J9YXS1 232 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 ACSL3O95573 720 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 CCDC65Q8IXS2 484 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 SLC17A8Q8NDX2 589 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 LRRC27Q9C0I9 530 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 BARHL2Q9NY43 387 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
NPC1L1-202ENST00000381160 SRRM3A6NNA2 597 aaPredicted RBP12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 ATP2A2P16615 1042 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 PDE6CP51160 858 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 GRB10Q13322 594 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 THEMIS2Q5TEJ8 643 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 CCDC105Q8IYK2 499 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 FBXO25Q8TCJ0 367 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 PIGBQ92521 554 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 SH3GL3Q99963 347 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 STMN4Q9H169 189 aaPredicted RBP12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 HOMER3Q9NSC5 361 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 TMOD4Q9NZQ9 345 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 TBK1Q9UHD2 729 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 PRDX5P30044 214 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 MECOMQ03112 1051 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 LRRC55Q6ZSA7 311 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 INTS8Q75QN2 995 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 GPBP1Q86WP2 473 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 SLITRK6Q9H5Y7 841 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 SH3GLB2Q9NR46 395 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 STXBP3O00186 592 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 ECHS1P30084 290 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 PRPHP41219 470 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 EIF6P56537 245 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 FAM47EQ6ZV65 393 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 TPCN2Q8NHX9 752 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 MAGEC3Q8TD91 643 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 COA7Q96BR5 231 aa12.11□□□□□ -0.47
NPC1L1-202ENST00000381160 PIGSQ96S52 555 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms