RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TRIM29Q14134 588 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 BCL2A1Q16548 175 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 LRRC8BQ6P9F7 803 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 TREML1Q86YW5 311 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 MDM1Q8TC05 714 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 CCDC51Q96ER9 411 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 ZNF333Q96JL9 665 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 RAB3IPQ96QF0 476 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 FAM114A2Q9NRY5 505 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 SAMSN1Q9NSI8 373 aaKnown RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 QPCTLQ9NXS2 382 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 CRYBG1Q9Y4K1 1723 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 ASAP2O43150 1006 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 SHBGP04278 402 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 PHKG2P15735 406 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 CYLC2Q14093 348 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 KIF22Q14807 665 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 CCDC6Q16204 474 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 AKAP4Q5JQC9 854 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 CABP7Q86V35 215 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 RIBC1Q8N443 379 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 SCAIQ8N9R8 606 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 PIGOQ8TEQ8 1089 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 NMD3Q96D46 503 aaKnown RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 IQCDQ96DY2 449 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 DYDC2Q96IM9 177 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 TUT1Q9H6E5 874 aaKnown RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 GJB4Q9NTQ9 266 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 KIAA1522Q9P206 1035 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 FAM32AQ9Y421 112 aaKnown RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 CD2APQ9Y5K6 639 aa10.14□□□□□ -0.79
PTPRA-204ENST00000380393 EPN1Q9Y6I3 576 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-204ENST00000380393 IL2RBP14784 551 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 ZNF18P17022 549 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 HOXD10P28358 340 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 SYKP43405 635 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 RTP1P59025 263 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 MAGOHP61326 146 aaKnown RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 BIRC3Q13489 604 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 PLS1Q14651 629 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 TMEM259Q4ZIN3 620 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 MAGOHBQ96A72 148 aaKnown RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 UIMC1Q96RL1 719 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 FAM129AQ9BZQ8 928 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 CLIC4Q9Y696 253 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 COL16A1Q07092 1604 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 A0A1B0GTH6 734 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 SPECC1L-ADORA2AF8WAN1 911 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 SPTLC2O15270 562 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 CDC27P30260 824 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 TTLL12Q14166 644 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 EAPPQ56P03 285 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 PIGWQ7Z7B1 504 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 MREGQ8N565 214 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 KCNG4Q8TDN1 519 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 NAT14Q8WUY8 206 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 CCDC127Q96BQ5 260 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 EAF2Q96CJ1 260 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 EPB41L5Q9HCM4 733 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 A0A1W2PQ67 120 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 IL4RP24394 825 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 TNFRSF8P28908 595 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 RNASELQ05823 741 aaKnown RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 FAM98CQ17RN3 349 aaKnown RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 CWF19L2Q2TBE0 894 aaKnown RBP10.13□□□□□ -0.79
PTPRA-204ENST00000380393 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 ANKRD13BQ86YJ7 626 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 LRRC34Q8IZ02 419 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 LINC00301Q8NCQ3 95 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 SUPT20HQ8NEM7 779 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 USP6NLQ92738 828 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 OLFM3Q96PB7 478 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 USP20Q9Y2K6 914 aa10.13□□□□□ -0.79
PTPRA-204ENST00000380393 HIP1O00291 1037 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 HGSO14964 777 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 ZFYP08048 801 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 FMR1Q06787 632 aaKnown RBP eCLIP10.12□□□□□ -0.792e-6■■■■□ 22.7
PTPRA-204ENST00000380393 R3HDM1Q15032 1099 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 SHROOM1Q2M3G4 852 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 ERMARDQ5T6L9 678 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 CEP70Q8NHQ1 597 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 CCDC42Q96M95 316 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 NUP88Q99567 741 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 GINM1Q9NU53 330 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 SEC63Q9UGP8 760 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 ZSCAN5CA6NGD5 496 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 SERPINB7O75635 380 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 NDUFA10O95299 355 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 GYPCP04921 128 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 COL6A2P12110 1019 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 VHLP40337 213 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 CSE1LP55060 971 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 BNIP1Q12981 228 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 ARHGEF6Q15052 776 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 PDCD4Q53EL6 469 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 TTC39CQ8N584 583 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 GATA6Q92908 595 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms