RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MAF1Q9H063 256 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 BHMT2Q9H2M3 363 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 NHEJ1Q9H9Q4 299 aaPredicted RBP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 AGPAT5Q9NUQ2 364 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 TYW1Q9NV66 732 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 FBXO28Q9NVF7 368 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 ARGLU1Q9NWB6 273 aaPredicted RBP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 CDC23Q9UJX2 597 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 ODF2LQ9ULJ1 636 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 PARP14Q460N5 1801 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 POLR2AP24928 1970 aaKnown RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 SLC16A3O15427 465 aaKnown RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 ZBED4O75132 1171 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 SLITRK3O94933 977 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 INPP5BP32019 993 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 CYP4A11Q02928 519 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 ADAM9Q13443 819 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 NFIL3Q16649 462 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 RINT1Q6NUQ1 792 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 KIAA1328Q86T90 577 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 APOBEC3FQ8IUX4 373 aaKnown RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 NELFCDQ8IXH7 590 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 SYN2Q92777 582 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 DYDC2Q96IM9 177 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 UIMC1Q96RL1 719 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 ZHX3Q9H4I2 956 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 MMRN2Q9H8L6 949 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 SLC38A10Q9HBR0 1119 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 METTL14Q9HCE5 456 aaKnown RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 SAGE1Q9NXZ1 904 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 TBC1D7Q9P0N9 293 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 CEP72Q9P209 647 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 PPP1R9AQ9ULJ8 1098 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 REXO2Q9Y3B8 237 aaKnown RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 CTDP1Q9Y5B0 961 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 FAM13AO94988 1023 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 LCA5LO95447 670 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 KLK7P49862 253 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 CACNB1Q02641 598 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 NAA30Q147X3 362 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 SPA17Q15506 151 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 TBC1D10BQ4KMP7 808 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 PCNX4Q63HM2 1172 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 PDXDC1Q6P996 788 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 CLEC4DQ8WXI8 215 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 GOLGA1Q92805 767 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 EEF2KMTQ96G04 330 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 CCDC42Q96M95 316 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 FGFBP2Q9BYJ0 223 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 GBA2Q9HCG7 927 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 ZNF112Q9UJU3 913 aa11.54□□□□□ -0.56
POLR2J3-201ENST00000379340 ASTN2O75129 1339 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 SSU72P8A0A1W2PR75 194 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 POTEB2H3BUK9 544 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 IPO5O00410 1097 aaKnown RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 USO1O60763 962 aaKnown RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 H2AFXP16104 143 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 NR2F2P24468 414 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 ZNF157P51786 506 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 VAV2P52735 878 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 ZNF131P52739 623 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 HERVK_113P62684 666 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 RAD51AP2Q09MP3 1159 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 CTTNQ14247 550 aaKnown RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 CCDC122Q5T0U0 273 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 XRRA1Q6P2D8 792 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 C1orf186Q6ZWK4 172 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 CACNA2D4Q7Z3S7 1137 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 SRGAP1Q7Z6B7 1085 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 TPH2Q8IWU9 490 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 SCYL3Q8IZE3 742 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 GPR161Q8N6U8 529 aaKnown RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 BAP1Q92560 729 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 RABGGTAQ92696 567 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 JAKMIP2Q96AA8 810 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 RUSC1Q9BVN2 902 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 UNC45AQ9H3U1 944 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 FAM207AQ9NSI2 230 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 RGL1Q9NZL6 768 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 PPP2R3BQ9Y5P8 575 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 UBIAD1Q9Y5Z9 338 aa11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 V9GYY5 206 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-201ENST00000379340 ANO9A1A5B4 782 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 CHMP2AO43633 222 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 FLOT1O75955 427 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 ARP10275 920 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 EPB41P11171 864 aaKnown RBP11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 ALAS1P13196 640 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 VCAM1P19320 739 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 GUCY2CP25092 1073 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 OAZ1P54368 228 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 KCNMA1Q12791 1236 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms